RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CHST4Q8NCG5 386 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 SPATA4Q8NEY3 305 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 OR4A4PQ8NGN8 299 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 OR5AR1Q8NGP9 310 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 OR1L1Q8NH94 360 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 LYPD6BQ8NI32 183 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 FAM81AQ8TBF8 368 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 OR51E1Q8TCB6 317 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 RASD2Q96D21 266 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 C20orf166-AS1Q96NR2 134 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 MICU1Q9BPX6 476 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 UCK2Q9BZX2 261 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 ACTR3CQ9C0K3 210 aaPredicted RBP0.34□□□□□ -2.35
PTPN22-203ENST00000460620 CHRNA10Q9GZZ6 450 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 RACGAP1Q9H0H5 632 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 PORCNQ9H237 461 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 TMEM38AQ9H6F2 299 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 TMEM185BQ9H7F4 350 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 GEMIN7Q9H840 131 aaKnown RBP0.34□□□□□ -2.35
PTPN22-203ENST00000460620 LYRM4Q9HD34 91 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 CCNB1IP1Q9NPC3 277 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 MED4Q9NPJ6 270 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 FBXO8Q9NRD0 319 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 MTCH1Q9NZJ7 389 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 IKZF2Q9UKS7 526 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 NUP50Q9UKX7 468 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 TBC1D24Q9ULP9 559 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 CAB39Q9Y376 341 aaPredicted RBP0.34□□□□□ -2.35
PTPN22-203ENST00000460620 RHBDD3Q9Y3P4 386 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 YLPM1P49750 1951 aaKnown RBP0.34□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF638Q14966 1978 aaKnown RBP0.34□□□□□ -2.35
PTPN22-203ENST00000460620 ICE1Q9Y2F5 2266 aa0.34□□□□□ -2.35
PTPN22-203ENST00000460620 LCTP09848 1927 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 IGHV1-69DA0A0B4J2H0 117 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SMCO3A2RU48 225 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 H0Y8G0 127 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SMKR1H3BMG3 65 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 WRBO00258 174 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 NME4O00746 187 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ZBTB5O15062 677 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 HMMRO75330 724 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 FKBP6O75344 327 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CLDN11O75508 207 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SERPINB7O75635 380 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 FCN3O75636 299 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CTAG2O75638 210 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 OR2F2O95006 317 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CCNB2O95067 398 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TDP2O95551 362 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TGM6O95932 706 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 IFNW1P05000 195 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ARG1P05089 322 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SERPINE2P07093 398 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ERCC1P07992 297 aaPredicted RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CTSGP08311 255 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 KRT16P08779 473 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CLTAP09496 248 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SLC35G6P0C7Q6 338 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 UBCP0CG48 685 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 PGA4P0DJD7 388 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 PGA3P0DJD8 388 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 GZMAP12544 262 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ANXA8P13928 327 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CTRB1P17538 263 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 NELFEP18615 380 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 GSTM3P21266 225 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 GALP22466 123 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 GGT2P36268 569 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 POLR2IP36954 125 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 RFC3P40938 356 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 C21orf59P57076 290 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TAS2R43P59537 309 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 RPS23P62266 143 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 C2orf54Q08AI8 447 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 LRRC74AQ0VAA2 488 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 MERTKQ12866 999 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TRAM2Q15035 370 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 PPP1R7Q15435 360 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TRMT5Q32P41 509 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 C6orf183Q5T699 404 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ANXA8L1Q5VT79 327 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 C9orf135Q5VTT2 229 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 UBE2UQ5VVX9 321 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 KDM4DQ6B0I6 523 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 C22orf42Q6IC83 251 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 RUFY3Q7L099 469 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 EIF3MQ7L2H7 374 aaKnown RBP0.34□□□□□ -2.36
PTPN22-203ENST00000460620 CMC1Q7Z7K0 106 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 FAM71AQ8IYT1 594 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 KATNAL2Q8IYT4 538 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 BBS5Q8N3I7 341 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 TRAM1L1Q8N609 369 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 PQLC3Q8N755 202 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 ZNF321PQ8N8H1 164 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 SNX31Q8N9S9 440 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 BPIFCQ8NFQ6 507 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 OR7G2Q8NG99 324 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 OR52E2Q8NGJ4 325 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 OR9G4Q8NGQ1 327 aa0.34□□□□□ -2.36
PTPN22-203ENST00000460620 OR51F2Q8NH61 342 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms