RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 DOK3Q7L591 496 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 FAM90A1Q86YD7 464 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 C11orf53Q8IXP5 236 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 BCL6BQ8N143 479 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-203ENST00000460264 FTMTQ8N4E7 242 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 OR1M1Q8NGA1 313 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 OR8B12Q8NGG6 310 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 LYZL4Q96KX0 146 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 TECTBQ96PL2 329 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 SMURF1Q9HCE7 757 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 G3V2T6 193 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 M0R129 80 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 HAX1O00165 279 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 ADAM20O43506 726 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 ENSAO43768 121 aaKnown RBP15.73■□□□□ 0.11
COL5A1-203ENST00000460264 MRPL3P09001 348 aaKnown RBP15.73■□□□□ 0.11
COL5A1-203ENST00000460264 EPHA2P29317 976 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 NPY4RP50391 375 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 CSNK2BP67870 215 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 SNCBQ16143 134 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 LCN1P1Q5VSP4 162 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 TEX36Q5VZQ5 186 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 WDR82Q6UXN9 313 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 C12orf54Q6X4T0 127 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 KRT77Q7Z794 578 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 LRRC29Q8WV35 223 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 ITPKCQ96DU7 683 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 PRRG3Q9BZD7 231 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 GABARAPL1Q9H0R8 117 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 RNPEPL1Q9HAU8 725 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 ERVK-18Q9QC07 812 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 ZNF391Q9UJN7 358 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 AP4S1Q9Y587 144 aa15.73■□□□□ 0.11
COL5A1-203ENST00000460264 IGHV3OR16-10A0A075B7F0 116 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 TRAV40A0A0B4J280 105 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 PRR32B1ATL7 298 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 NDUFA2O43678 99 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 PLATP00750 562 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 GYPAP02724 150 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 FASP25445 335 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 UBA52P62987 128 aaKnown RBP15.72■□□□□ 0.11
COL5A1-203ENST00000460264 IL5RAQ01344 420 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 SLX4IPQ5VYV7 408 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 KDM4DQ6B0I6 523 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 KCTD18Q6PI47 426 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-203ENST00000460264 DEGS2Q6QHC5 323 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 RBMS3Q6XE24 437 aaKnown RBP15.72■□□□□ 0.11
COL5A1-203ENST00000460264 GALNT4Q8N4A0 578 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 DUS3LQ96G46 650 aaKnown RBP15.72■□□□□ 0.11
COL5A1-203ENST00000460264 ZNF48Q96MX3 618 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-203ENST00000460264 TLNRD1Q9H1K6 362 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 MPC1Q9Y5U8 109 aa15.72■□□□□ 0.11
COL5A1-203ENST00000460264 IGHV3OR15-7A0A075B7D8 119 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ANXA2P2A6NMY6 339 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ZAR1LA6NP61 321 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 PSMD9O00233 223 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 FCN3O75636 299 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 CST4P01036 141 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 COMPP49747 757 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 FGF12P61328 243 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ROM1Q03395 351 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 PRDX4Q13162 271 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 C12orf73Q69YU5 71 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 C9orf139Q6ZV77 190 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 BCDIN3DQ7Z5W3 292 aaKnown RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 AMIGO2Q86SJ2 522 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ZDHHC13Q8IUH4 622 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 GCDHQ92947 438 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 OR8B4Q96RC9 309 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 CNN2Q99439 309 aaKnown RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 MICU1Q9BPX6 476 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 RTL8AQ9BWD3 113 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 TTTY10Q9BZA0 68 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 MS4A7Q9GZW8 240 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-203ENST00000460264 ABCB9Q9NP78 766 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 FAM206AQ9NX38 181 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 COPS3Q9UNS2 423 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 TMEM14AQ9Y6G1 99 aa15.71■□□□□ 0.11
COL5A1-203ENST00000460264 A0A0U1RQV5 110 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 TMEM89A2RUT3 159 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 DNAJC9-AS1A6NH13 148 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 ZNF850A8MQ14 1090 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 FCGR1AP12314 374 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 CFHR2P36980 270 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 EFNB1P98172 346 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 POU4F2Q12837 409 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 AADACL4Q5VUY2 407 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 CD276Q5ZPR3 534 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 TCEANCQ8N8B7 351 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 TMEM163Q8TC26 289 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 HPSE2Q8WWQ2 592 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 ASB17Q8WXJ9 295 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 LRTOMTQ8WZ04 291 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 OR5P3Q8WZ94 311 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 C1orf147Q96MC9 270 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-203ENST00000460264 PKP2Q99959 881 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 MROQ9BYG7 248 aa15.7■□□□□ 0.1
COL5A1-203ENST00000460264 FGF23Q9GZV9 251 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-203ENST00000460264 KAAG1Q9UBP8 84 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms