RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 SNU13P55769 128 aaKnown RBP17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 DTX1Q86Y01 620 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 CNTNAP3BQ96NU0 1288 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 METTL7AQ9H8H3 244 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 LMAN1LQ9HAT1 526 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 A0A1B0GV50 99 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 ANKUB1A6NFN9 424 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 ZNF878C9JN71 531 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 OR2A2Q6IF42 318 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 OR10Z1Q8NGY1 313 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 RNF141Q8WVD5 230 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 PTX4Q96A99 478 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 LMO7DNF2Z398 122 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 G3V3Y1 287 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 STMND1H3BQB6 276 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 HEXBP07686 556 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 QDPRP09417 244 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 ZNF17P17021 662 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 GABRR1P24046 479 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 BLVRBP30043 206 aaPredicted RBP17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 GABREP78334 506 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 CHAF1BQ13112 559 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 GPR132Q9UNW8 380 aa17.28■□□□□ 0.36
CNEP1R1-203ENST00000458059 IGKV1-9A0A0C4DH69 117 aa17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 TEX13DA0A0J9YY54 714 aaPredicted RBP17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 MED6O75586 246 aa17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 KCNJ3P48549 501 aa17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 PCK2Q16822 640 aa17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 TMEM176BQ3YBM2 270 aaPredicted RBP17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 C1orf147Q96MC9 270 aaPredicted RBP17.27■□□□□ 0.36
CNEP1R1-203ENST00000458059 IGKV1D-8A0A087WSZ0 117 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 A0A1W2PR77 199 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 DBX1A6NMT0 343 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 OR2J2O76002 312 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 MUC1P15941 1255 aaPredicted RBP17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 FAHP16930 419 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 HFEQ30201 348 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 BATF2Q8N1L9 274 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 UQCC2Q9BRT2 126 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 RTBDNQ9BSG5 229 aaPredicted RBP17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 SLC2A4RGQ9NR83 387 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 ZNF581Q9P0T4 197 aa17.27■□□□□ 0.35
CNEP1R1-203ENST00000458059 CD37P11049 281 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 HLA-GP17693 338 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 CD27P26842 260 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 BRICD5Q6PL45 260 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 DTWD2Q8NBA8 298 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 CDC6Q99741 560 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 DUX1O43812 170 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 SFT2D2O95562 160 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 APOBEC1P41238 236 aaKnown RBP17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 FLI1Q01543 452 aaPredicted RBP17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 DEGS2Q6QHC5 323 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 PLXDC1Q8IUK5 500 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 UQCC1Q9NVA1 299 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 SHANK1Q9Y566 2161 aa17.26■□□□□ 0.35
CNEP1R1-203ENST00000458059 RIPPLY1Q0D2K3 151 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 C6orf201Q7Z4U5 140 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 SPAG16Q8N0X2 631 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 KCNG3Q8TAE7 436 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 AKIRIN1Q9H9L7 192 aaPredicted RBP17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 LSM5Q9Y4Y9 91 aaKnown RBP17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 GDF9O60383 454 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 IGHG1P01857 330 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 DBHP09172 617 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 CD80P33681 288 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 LPAR6P43657 344 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 ST8SIA1Q92185 356 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 MVB12AQ96EY5 273 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 PGAM5Q96HS1 289 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 RHOFQ9HBH0 211 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 ZNF175Q9Y473 711 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 FGF16O43320 207 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 NDUFA2O43678 99 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 SPP1P10451 314 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 CBR1P16152 277 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 TGIF1Q15583 401 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 MST1LQ2TV78 715 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 SP6Q3SY56 376 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 C20orf196Q8IYI0 205 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 ZNF501Q96CX3 271 aaPredicted RBP17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 SDHAF3Q9NRP4 125 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 ALKBH4Q9NXW9 302 aa17.25■□□□□ 0.35
CNEP1R1-203ENST00000458059 FAM221AA4D161 298 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 RAB19A4D1S5 217 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 OR5H15A6NDH6 313 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 FAM157CP0CG43 387 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 FOSL2P15408 326 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 ZNF43P17038 809 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 PDZK1IP1Q13113 114 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 AADACL3Q5VUY0 350 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 SLC30A7Q8NEW0 376 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 POC1BQ8TC44 478 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 OR10A2Q9H208 303 aa17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 ESRP2Q9H6T0 727 aaKnown RBP17.24■□□□□ 0.35
CNEP1R1-203ENST00000458059 MBTPS2O43462 519 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms