RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 RNF165Q6ZSG1 346 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 Q6ZSR9 355 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 BHLHA9Q7RTU4 235 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 DOLPP1Q86YN1 238 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 GALNT16Q8N428 558 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 PARP16Q8N5Y8 322 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZNF439Q8NDP4 499 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR51S1Q8NGJ8 323 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR6K6Q8NGW6 343 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TBCKQ8TEA7 893 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ACOT12Q8WYK0 555 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 IL22RA2Q969J5 263 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 REEP6Q96HR9 211 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR7D2Q96RA2 312 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ABHD14AQ9BUJ0 271 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 C1orf50Q9BV19 199 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 HCAR1Q9BXC0 346 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR11A1Q9GZK7 315 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 SEMA6AQ9H2E6 1030 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CXorf36Q9H7Y0 433 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 EFCAB1Q9HAE3 211 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ADGRL4Q9HBW9 690 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 AMBNQ9NP70 447 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 DCAF13Q9NV06 445 aaKnown RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 MRPS18AQ9NVS2 196 aaKnown RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 MED9Q9NWA0 146 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 C1RLQ9NZP8 487 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 RNF6Q9Y252 685 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TMED7Q9Y3B3 224 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 SIPA1L3O60292 1781 aaPredicted RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 COL4A1P02462 1669 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 MYH7P12883 1935 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZNFX1Q9P2E3 1918 aaKnown RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 SSC5DA1L4H1 1573 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CFAP54Q96N23 3096 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 GLYATL1P3A0A0U1RQE8 302 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ZNF816-ZNF321PA0A0X1KG74 233 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TRAPPC13A5PLN9 417 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 NKX2-6A6NCS4 301 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 C15orf65H3BRN8 121 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 KIR2DS3K7RE56 304 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ITM2AO43736 263 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 WDR1O75083 606 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 CA11O75493 328 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 FOXH1O75593 365 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TRAPPC6AO75865 159 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 DIRAS1O95057 198 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 NGFRP08138 427 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 FOLR2P14207 255 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ZNF250P15622 560 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 RAB3BP20337 219 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 GPD1P21695 349 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 NBL1P41271 181 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 RORCP51449 518 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 DLX6P56179 175 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 CDKL1Q00532 357 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TIAL1Q01085 375 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS41-209ENST00000457055 EWSR1Q01844 656 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS41-209ENST00000457055 TCF15Q12870 199 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 GAB1Q13480 694 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 OR2F1Q13607 317 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 KIR2DS3Q14952 304 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 EXOSC7Q15024 291 aaKnown RBP4.69□□□□□ -1.66
VPS41-209ENST00000457055 QPRTQ15274 297 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ZNF77Q15935 545 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 MICAQ29983 383 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TBC1D28Q2M2D7 210 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 OR10J3Q5JRS4 329 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 GLYATQ6IB77 296 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ZNF613Q6PF04 617 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 DCUN1D2Q6PH85 259 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 WDR74Q6RFH5 385 aaPredicted RBP4.69□□□□□ -1.66
VPS41-209ENST00000457055 ENPP6Q6UWR7 440 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 MOB3BQ86TA1 216 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 PDZD9Q8IXQ8 264 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 BLIDQ8IZY5 108 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 RYBPQ8N488 228 aaPredicted RBP4.69□□□□□ -1.66
VPS41-209ENST00000457055 ARIH2OSQ8N7S6 290 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 OR52E4Q8NGH9 312 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 OR2AJ1Q8NGZ0 328 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ZFAND1Q8TCF1 268 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 HAVCR2Q8TDQ0 301 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 SMAP2Q8WU79 429 aaPredicted RBP4.69□□□□□ -1.66
VPS41-209ENST00000457055 DCAKDQ8WVC6 231 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 S100ZQ8WXG8 99 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ATG4AQ8WYN0 398 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 TMEM125Q96AQ2 219 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 SARAFQ96BY9 339 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 PYCR2Q96C36 320 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ROPN1LQ96C74 230 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 PAGE5Q96GU1 130 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 DUX3Q96PT4 197 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 ATP5SQ99766 215 aa4.69□□□□□ -1.66
VPS41-209ENST00000457055 RAB11FIP5Q9BXF6 653 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms