RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SLC6A7Q99884 636 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 SUCNR1Q9BXA5 334 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 COPS3Q9UNS2 423 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 COL6A5A8TX70 2615 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 TMEM269A0A1B0GVZ9 245 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 OOEPA6NGQ2 149 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 VENTXO95231 258 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 RIDAP52758 137 aaKnown RBP13.54□□□□□ -0.24
CPSF6-203ENST00000456847 IL5RAQ01344 420 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 PRDX4Q13162 271 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF829Q3KNS6 432 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-203ENST00000456847 DEGS2Q6QHC5 323 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 LRRC29Q8WV35 223 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 OR8B4Q96RC9 309 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 RTL8AQ9BWD3 113 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 GTF2A1LQ9UNN4 478 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 MXRA5Q9NR99 2828 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF670-ZNF695F2Z2N8 137 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 PHYHO14832 338 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ADAM20O43506 726 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF254O75437 659 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 FPR2P25090 351 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 CSNK2BP67870 215 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 KPNB1Q14974 876 aaKnown RBP13.54□□□□□ -0.24
CPSF6-203ENST00000456847 KCTD8Q6ZWB6 473 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 WDR86Q86TI4 376 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF679Q8IYX0 411 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 OR1M1Q8NGA1 313 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 C22orf15Q8WYQ4 148 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 PIGCQ92535 297 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 LYZL4Q96KX0 146 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 RBM4BQ9BQ04 359 aaKnown RBP13.54□□□□□ -0.24
CPSF6-203ENST00000456847 PPP1R3EQ9H7J1 279 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 MPC1Q9Y5U8 109 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 SVEP1Q4LDE5 3571 aa13.54□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF850A8MQ14 1090 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 FSHBP01225 129 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 GYPAP02724 150 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 ACKR3P25106 362 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 AADACL4Q5VUY2 407 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 WDR25Q64LD2 544 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-203ENST00000456847 GCSAMQ8N6F7 178 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 SEMA6DQ8NFY4 1073 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 JMJD8Q96S16 334 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 MNTQ99583 582 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 GABARAPL3Q9BY60 117 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 FAM206AQ9NX38 181 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 ORC6Q9Y5N6 252 aa13.53□□□□□ -0.24
CPSF6-203ENST00000456847 IGHV3OR15-7A0A075B7D8 119 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 ACOD1A6NK06 481 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 EGR1P18146 543 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 MAP2K3P46734 347 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 CXCR4P61073 352 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 ACTR3P61158 418 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF322Q6U7Q0 402 aaPredicted RBP13.52□□□□□ -0.24
CPSF6-203ENST00000456847 ZDHHC23Q8IYP9 409 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 OR51G2Q8NGK0 314 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 ITPKCQ96DU7 683 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.24
CPSF6-203ENST00000456847 PKP2Q99959 881 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 NUDT16L1Q9BRJ7 211 aaKnown RBP13.52□□□□□ -0.24
CPSF6-203ENST00000456847 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 PBOV1Q9GZY1 135 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 RNPEPL1Q9HAU8 725 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 NUP50Q9UKX7 468 aa13.52□□□□□ -0.24
CPSF6-203ENST00000456847 PRR32B1ATL7 298 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 NDUFA2O43678 99 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.25
CPSF6-203ENST00000456847 PSMB10P40306 273 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 NPY4RP50391 375 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 ROM1Q03395 351 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 ZFP1Q6P2D0 407 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 THAP5Q7Z6K1 395 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 GALNT4Q8N4A0 578 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-203ENST00000456847 HIST1H2AAQ96QV6 131 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 CTSZQ9UBR2 303 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 DNHD1Q96M86 4753 aa13.52□□□□□ -0.25
CPSF6-203ENST00000456847 A0A0U1RQV5 110 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 ZNF816-ZNF321PA0A0X1KG74 233 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 TMEM210A6NLX4 147 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 LOC110117498-PIK3R3F6TDL0 507 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 CST4P01036 141 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 DCTDP32321 178 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 HILS1P60008 231 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 EFNB1P98172 346 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 PAX8Q06710 450 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 MFGE8Q08431 387 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-203ENST00000456847 WDR82Q6UXN9 313 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 USP43Q70EL4 1123 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 FAM90A1Q86YD7 464 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 RNF170Q96K19 258 aa13.51□□□□□ -0.25
CPSF6-203ENST00000456847 TBX5Q99593 518 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms