RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CER1O95813 267 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 MPIG6BO95866 241 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 WDPCPO95876 746 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 GSTP1P09211 210 aaKnown RBP16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 HLA-GP17693 338 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 HRH1P35367 487 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 SUCLG1P53597 346 aaKnown RBP16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 PLAC9Q5JTB6 97 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 LYG2Q86SG7 212 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 NAA40Q86UY6 237 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 ZIC4Q8N9L1 334 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 PXT1Q8NFP0 134 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 CST11Q9H112 138 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 ZNF230Q9UIE0 474 aaPredicted RBP16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 DKKL1Q9UK85 242 aa16.17■□□□□ 0.18
SEMA3B-209ENST00000456560 NCOA6Q14686 2063 aaPredicted RBP16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 NSG1A0A0A6YYJ2 146 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 A0A1B0GW55 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 SOCS1O15524 211 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L2P0CJ85 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L3P0CJ86 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L4P0CJ87 422 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L5P0CJ88 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L6P0CJ89 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4L7P0CJ90 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 PRF1P14222 555 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 EIF3IQ13347 325 aaKnown RBP16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 RSPO1Q2MKA7 263 aaPredicted RBP16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 LPCAT3Q6P1A2 487 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 CRIP3Q6Q6R5 217 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 TMEM156Q8N614 296 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 GJC3Q8NFK1 279 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 PGAM5Q96HS1 289 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 SLC25A32Q9H2D1 315 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 DUX4Q9UBX2 424 aa16.16■□□□□ 0.18
SEMA3B-209ENST00000456560 A0A0J9YW62 118 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 OR2AT4A6NND4 320 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 NPIPA2E9PIF3 369 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 NPIPA3F8WFD2 350 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 MASP2O00187 686 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 DHHO43323 396 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 CBR3O75828 277 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 STK17BO94768 372 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 HLA-AP01891 365 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 HCKP08631 526 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 FOLR3P41439 243 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 GUCA1AP43080 201 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 TMEM50BP56557 158 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 RAC1P63000 192 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 CSNK2A1P68400 391 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 PPP1R1AQ13522 171 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 GFOD2Q3B7J2 385 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 ZNF468Q5VIY5 522 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 TMEM41AQ96HV5 264 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 ZC3H10Q96K80 434 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 HPF1Q9NWY4 346 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 SLC39A1Q9NY26 324 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 FOXD3Q9UJU5 478 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 A0A0U1RQV5 110 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 OR5H15A6NDH6 313 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 UBBP0CG47 229 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 LIPCP11150 499 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 HIST1H1DP16402 221 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 FAHD2BQ6P2I3 314 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 Q6ZSR3 168 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 BEST3Q8N1M1 668 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 FAHD2AQ96GK7 314 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 JSRP1Q96MG2 331 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 BANF2Q9H503 90 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 V9GYS6 101 aa16.15■□□□□ 0.18
SEMA3B-209ENST00000456560 C9orf170A2RU37 121 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 AVPR2P30518 371 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 OTX1P32242 354 aaPredicted RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 RPS27AP62979 156 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 UBA52P62987 128 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 ZNF546Q86UE3 836 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 OR10K1Q8NGX5 313 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 MITD1Q8WV92 249 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 ST8SIA2Q92186 375 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 INTS12Q96CB8 462 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 RAB3CQ96E17 227 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 TMEM59Q9BXS4 323 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 FN3KRPQ9HA64 309 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 NOP16Q9Y3C1 178 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 A0A1W2PP11 408 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 PLATP00750 562 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 MGMTP16455 207 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 THBS4P35443 961 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 B3GALT5-AS1P59052 145 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 ECH1Q13011 328 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 PNLIPRP3Q17RR3 467 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 TRIM61Q5EBN2 209 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 DTX1Q86Y01 620 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 OR4K15Q8NH41 348 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 SRXN1Q9BYN0 137 aa16.14■□□□□ 0.17
SEMA3B-209ENST00000456560 LOC100509620A0A075B734 347 aa16.13■□□□□ 0.17
SEMA3B-209ENST00000456560 OR5H14A6NHG9 310 aa16.13■□□□□ 0.17
SEMA3B-209ENST00000456560 DNASE2O00115 360 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-209ENST00000456560 SIGLEC5O15389 551 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms