RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 LTBP4Q8N2S1 1624 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 SLIT2O94813 1529 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 GOLGA8IPA6NC78 632 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 TMEM210A6NLX4 147 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 H7C0C1 242 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 MRPS12O15235 138 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 RAD51BO15315 384 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 SGCEO43556 437 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 FKBP6O75344 327 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 TRAPPC6AO75865 159 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 AHSA1O95433 338 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PTTG1O95997 202 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 LALBAP00709 142 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 IGKV5-2P06315 115 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 CALM1P0DP23 149 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 CALM2P0DP24 149 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 CALM3P0DP25 149 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 GCKP35557 465 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 RORCP51449 518 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 HNRNPA3P51991 378 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 SUB1P53999 127 aaKnown RBP eCLIP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PRPS1P60891 318 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PITPNAQ00169 270 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 ZNF45Q02386 682 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 SLC25A11Q02978 314 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 KDSRQ06136 332 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 GTF3C1Q12789 2109 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 FADDQ13158 208 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 OR4D1Q15615 310 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 ZBTB6Q15916 424 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PGGHGQ32M88 737 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PARP15Q460N3 678 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 ZBED5Q49AG3 693 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 COQ5Q5HYK3 327 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 OR2B11Q5JQS5 317 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 THEM4Q5T1C6 240 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 ZNF571Q7Z3V5 609 aaPredicted RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 WDR31Q8NA23 367 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 DUSP18Q8NEJ0 188 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 OR6K6Q8NGW6 343 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 OR51A7Q8NH64 312 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 FANK1Q8TC84 345 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PGLYRP4Q96LB8 373 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 COL21A1Q96P44 957 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 WDR54Q9H977 334 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 NANOGQ9H9S0 305 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 FOLH1BQ9HBA9 442 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 TMBIM4Q9HC24 238 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 KCNJ16Q9NPI9 418 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 IFT46Q9NQC8 304 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 NLE1Q9NVX2 485 aaPredicted RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 SLC25A37Q9NYZ2 338 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 KCNIP1Q9NZI2 227 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 MAT2BQ9NZL9 334 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 KLK12Q9UKR0 248 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 NEU3Q9UQ49 428 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 FADS3Q9Y5Q0 445 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 XIRP1Q702N8 1843 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 LAMB4A4D0S4 1761 aa2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 N4BP2Q86UW6 1770 aaPredicted RBP2.28□□□□□ -2.04
R3HDM1-212ENST00000456040 PLCH1Q4KWH8 1693 aa2.28□□□□□ -2.05
R3HDM1-212ENST00000456040 CCDC171Q6TFL3 1326 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 A0A0A6YYD5 115 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 A0A1B0GVI7 797 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA6L4A6NEF3 574 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA6L10A6NI86 522 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA8JA6NMD2 632 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 LYRM9A8MSI8 78 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 SEC14L6B5MCN3 397 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA8KD6RF30 607 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 SMKR1H3BMG3 65 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA8MH3BSY2 632 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 K7EMT4 169 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GABRPO00591 440 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 NME4O00746 187 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 MAGEB4O15481 346 aaPredicted RBP2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 LYPLA1O75608 230 aaPredicted RBP2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 MMP23AO75900 390 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 OR5F1O95221 314 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 ARG1P05089 322 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 HPNP05981 417 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 KRT7P08729 469 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 GOLGA8HP0CJ92 632 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 LIPCP11150 499 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 PSG2P11465 335 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 PSKH1P11801 424 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 FOLR1P15328 257 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 TCP1P17987 556 aaKnown RBP2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 VDAC1P21796 283 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 MAGEA3P43357 314 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 DNASE1L1P49184 302 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 RPL31P62899 125 aaKnown RBP2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 ACVR1Q04771 509 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 BNIP2Q12982 314 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 ARL6IP1Q15041 203 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 ZNHIT3Q15649 155 aaPredicted RBP2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 ACTL10Q5JWF8 245 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 CNIH2Q6PI25 160 aa2.27□□□□□ -2.05
R3HDM1-212ENST00000456040 CD300LGQ6UXG3 332 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms