RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LRRC18Q8N456 261 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SPHK2Q9NRA0 654 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 NDRG2Q9UN36 371 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 A0A1B0GU03 582 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 KLRC4-KLRK1H3BQV0 150 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CTSDP07339 412 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 JMJD7P0C870 316 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RPS4Y1P22090 263 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 AKR1C3P42330 323 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TNFSF10P50591 281 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 HHEXQ03014 270 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 STUMQ69YW2 141 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SLC48A1Q6P1K1 146 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RBM23Q86U06 439 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 AKR7LQ8NHP1 331 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 LAT2Q9GZY6 243 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 S1PR5Q9H228 398 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 GIMAP2Q9UG22 337 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TIMM10BQ9Y5J6 103 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 DMRT1Q9Y5R6 373 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 AHDC1Q5TGY3 1603 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 DCDC2BA2VCK2 349 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 NPIPB13A6NJU9 1138 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TISP43B9A030 160 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 NPIPB4C9JG80 1138 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CNMDO75829 334 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 C8orf89P0DMQ9 161 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ARRB2P32121 409 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CDK5R1Q15078 307 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 IZUMO4Q1ZYL8 232 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MORN4Q8NDC4 146 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MAGT1Q9H0U3 335 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR51M1Q9H341 326 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CDCP1Q9H5V8 836 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CLDND1Q9NY35 253 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 IQCF5A8MTL0 148 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SCO2O43819 266 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MRPL33O75394 65 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 GUSBP08236 651 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 GALNSP34059 522 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RPL34P49207 117 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CDKN2DP55273 166 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RPL27P61353 136 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SIM1P81133 766 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MRM1Q6IN84 353 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR2M7Q8NG81 312 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR52I1Q8NGK6 324 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ORAI1Q96D31 301 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 YIPF6Q96EC8 236 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MS4A10Q96PG2 267 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RAB33BQ9H082 229 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 VSX1Q9NZR4 365 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 APOBEC3BQ9UH17 382 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF223Q9UK11 482 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 C19orf53Q9UNZ5 99 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 LY75O60449 1722 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM235A6NFC5 223 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 J3QW42 95 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 IFNL4K9M1U5 179 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 MBTPS2O43462 519 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 HSPB1P04792 205 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 POU3F1Q03052 451 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 NFATC4Q14934 902 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TREML2Q5T2D2 321 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SCD5Q86SK9 330 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SH2D2AQ9NP31 389 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF230Q9UIE0 474 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TRAPPC2LQ9UL33 140 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 LEFTY2O00292 366 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ENPP3O14638 875 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 LANCL1O43813 399 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 P2RY1P47900 373 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SUCLG1P53597 346 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CST6Q15828 149 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 FDX2Q6P4F2 183 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TCF23Q7RTU1 214 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR2I1PQ8NGU4 316 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 PRR11Q96HE9 360 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 TOX2Q96NM4 488 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CHST11Q9NPF2 352 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OSER1Q9NX31 292 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 METTL1Q9UBP6 276 aaKnown RBP4.74□□□□□ -1.65
CSMD3-204ENST00000455883 ZFP30Q9Y2G7 519 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 PIEZO2Q9H5I5 2752 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 CTNSO60931 367 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR5AL1P0C617 328 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SFTA3P0C7M3 94 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 SLC25A4P12235 298 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 DCTDP32321 178 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 RIGQ13278 110 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 OR4D1Q15615 310 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 FER1L6-AS2Q96M78 137 aa4.74□□□□□ -1.65
CSMD3-204ENST00000455883 C17orf105B2RV13 164 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CTDSP2O14595 271 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 STC2O76061 302 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 VENTXO95231 258 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CAPNS1P04632 268 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 THBS4P35443 961 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms