RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TMEM203Q969S6 136 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 FBXW5Q969U6 566 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 ADAT3Q96EY9 351 aaPredicted RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 TRMT61AQ96FX7 289 aaKnown RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 OR14A2Q96R54 314 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 SLC30A2Q9BRI3 323 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 PLK3Q9H4B4 646 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 TXNL4BQ9NX01 149 aaKnown RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 NDUFA13Q9P0J0 144 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 PLEKHB1Q9UF11 243 aaPredicted RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 SSR3Q9UNL2 185 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 PIGLQ9Y2B2 252 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
TRAF4-206ENST00000454852 MPC1Q9Y5U8 109 aa9.62□□□□□ -0.87
TRAF4-206ENST00000454852 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 ANKRD61A6NGH8 418 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 AIREO43918 545 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 FAHP16930 419 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 CTF1Q16619 201 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 MST1LQ2TV78 715 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 ALKBH6Q3KRA9 238 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 CLVS2Q5SYC1 327 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 LRP11Q86VZ4 500 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 OR5D14Q8NGL3 314 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 RAB2BQ8WUD1 216 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 NEUROG1Q92886 237 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 FGGYQ96C11 551 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 OR51E2Q9H255 320 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 PPIL3Q9H2H8 161 aaKnown RBP9.61□□□□□ -0.87
TRAF4-206ENST00000454852 PLEKHF2Q9H8W4 249 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 PLEKHA1Q9HB21 404 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 FAIMQ9NVQ4 179 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 GPR160Q9UJ42 338 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 GSTK1Q9Y2Q3 226 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 RHBDD3Q9Y3P4 386 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 CEPT1Q9Y6K0 416 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 GCN1Q92616 2671 aaKnown RBP9.61□□□□□ -0.87
TRAF4-206ENST00000454852 ICE1Q9Y2F5 2266 aa9.61□□□□□ -0.87
TRAF4-206ENST00000454852 ABCA4P78363 2273 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 TRIM64BA6NI03 449 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 GMDSO60547 372 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 LMX1BO60663 402 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 LILRA1O75019 489 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 PTBP3O95758 552 aaKnown RBP9.6□□□□□ -0.87
TRAF4-206ENST00000454852 ALDOBP05062 364 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 ZNF20P17024 532 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 MAGEB1P43366 347 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 SOX2P48431 317 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 INSL4Q14641 139 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 HSD17B12Q53GQ0 312 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 C11orf71Q6IPW1 123 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 VHLLQ6RSH7 139 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 CDH26Q8IXH8 852 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 FBXL14Q8N1E6 418 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 MUC15Q8N387 334 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 SPERTQ8NA61 448 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 DNAAF1Q8NEP3 725 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 OR13G1Q8NGZ3 307 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 IGFBPL1Q8WX77 278 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 RPL3LQ92901 407 aaKnown RBP9.6□□□□□ -0.87
TRAF4-206ENST00000454852 SPSB1Q96BD6 273 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 KCTD7Q96MP8 289 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 DIRC2Q96SL1 478 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 CHCHD6Q9BRQ6 235 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 ZCCHC4Q9H5U6 513 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 NOX4Q9NPH5 578 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 SNTG1Q9NSN8 517 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 CBLN4Q9NTU7 201 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 TMEM100Q9NV29 134 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 MYEF2Q9P2K5 600 aaKnown RBP9.6□□□□□ -0.87
TRAF4-206ENST00000454852 CKLFQ9UBR5 152 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
TRAF4-206ENST00000454852 IGKV1-9A0A0C4DH69 117 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 MEGF11A6BM72 1044 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 DPPA5A6NC42 116 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 A6NHS1 94 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 SULT1B1O43704 296 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 TIMM8AO60220 97 aaPredicted RBP9.59□□□□□ -0.87
TRAF4-206ENST00000454852 NRASP01111 189 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 CD55P08174 381 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 PRF1P14222 555 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 ATF1P18846 271 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 SRMP19623 302 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 CFPP27918 469 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 SSTR2P30874 369 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 GNALP38405 381 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 MTNR1BP49286 362 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 PPOXP50336 477 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 PRSS12P56730 875 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 CNN3Q15417 329 aaKnown RBP9.59□□□□□ -0.87
TRAF4-206ENST00000454852 UBE2V2Q15819 145 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 CEACAM21Q3KPI0 293 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 FAM76BQ5HYJ3 339 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 AGAP6Q5VW22 663 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 GPR107Q5VW38 600 aa9.59□□□□□ -0.87
TRAF4-206ENST00000454852 C22orf42Q6IC83 251 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms