RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 GFERP55789 205 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 BAHD1Q8TBE0 780 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 PADI1Q9ULC6 663 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 RER1O15258 196 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 SPINT1O43278 529 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 FAHP16930 419 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 FBLP22087 321 aaKnown RBP11.08□□□□□ -0.63
UBE3B-204ENST00000449510 ZSCAN4Q8NAM6 433 aaPredicted RBP11.08□□□□□ -0.63
UBE3B-204ENST00000449510 OR1J1Q8NGS3 322 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 PIGCQ92535 297 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 BORCS8Q96FH0 119 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 LIN37Q96GY3 246 aaPredicted RBP11.08□□□□□ -0.63
UBE3B-204ENST00000449510 OR5B12Q96R08 314 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.63
UBE3B-204ENST00000449510 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
UBE3B-204ENST00000449510 NPIPA2E9PIF3 369 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 NPIPA3F8WFD2 350 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 SOX15O60248 233 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 LILRB3O75022 631 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 ACAA1P09110 424 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-204ENST00000449510 RNF224P0DH78 156 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 FOLR1P15328 257 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 PNLIPRP2P54317 469 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 MICBQ29980 383 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 BMPERQ8N8U9 685 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 ASB16Q96NS5 453 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 GPR173Q9NS66 373 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 AK3Q9UIJ7 227 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 A8MVM7 634 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 RAB5AP20339 215 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 MST1P26927 711 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 SLC6A8P48029 635 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 ELLP55199 621 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-204ENST00000449510 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
UBE3B-204ENST00000449510 DHRS11Q6UWP2 260 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 TMEM156Q8N614 296 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 CMTM3Q96MX0 182 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 TIMP4Q99727 224 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 SEC11CQ9BY50 192 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 NPTNQ9Y639 398 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 R4GMQ9 66 aa11.08□□□□□ -0.64
UBE3B-204ENST00000449510 IGHV3-9P01782 118 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 HEXBP07686 556 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SULT1A1P50225 295 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 FAM189A2Q15884 450 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF595Q8IYB9 648 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 RNF128Q8TEB7 428 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 PRRX2Q99811 253 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 AP4M1O00189 453 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SSSCA1O60232 199 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 BCKDHBP21953 392 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 DVL1P1P54792 670 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 TAS2R46P59540 309 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 CDCP2Q5VXM1 449 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 PARM1Q6UWI2 310 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 NPSR1Q6W5P4 371 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SLC25A42Q86VD7 318 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 OR51H1Q8NH63 302 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 OR10C1Q96KK4 312 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SCN4AP35499 1836 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ZNHIT1O43257 154 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SPRY1O43609 319 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 EDN3P14138 238 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 CLDN17P56750 224 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 GABREP78334 506 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF117Q03924 483 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 SGCBQ16585 318 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 ANKRD9Q96BM1 317 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-204ENST00000449510 PRRG4Q9BZD6 226 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 BPTFQ12830 3046 aa11.07□□□□□ -0.64
UBE3B-204ENST00000449510 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 MOSPD3O75425 235 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 MMP7P09237 267 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 DUSP1P28562 367 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 POLR2HP52434 150 aaKnown RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 PCK2Q16822 640 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 OR2B11Q5JQS5 317 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 LY6G6FQ5SQ64 297 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms