RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ACKR3P25106 362 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 MAGEB1P43366 347 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 SOX2P48431 317 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 BDH1Q02338 343 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 AGAP6Q5VW22 663 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 LRRC75A-AS1Q8N1F1 130 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 ZNF611Q8N823 705 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 OR51A4Q8NGJ6 313 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 OR13C3Q8NGS6 347 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 RGP1Q92546 391 aaPredicted RBP14.7□□□□□ -0.06
LIME1-202ENST00000444951 PIGTQ969N2 578 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 TMEM203Q969S6 136 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 MRPS26Q9BYN8 205 aaKnown RBP14.7□□□□□ -0.06
LIME1-202ENST00000444951 MSL2Q9HCI7 577 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 DYNLRB1Q9NP97 96 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 ISYNA1Q9NPH2 558 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 ZNF391Q9UJN7 358 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 HHLA2Q9UM44 414 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 PIGLQ9Y2B2 252 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 ZNF281Q9Y2X9 895 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 PLSCR5A0PG75 271 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 B9A039 149 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 PLPP2O43688 288 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 MTRF1O75570 445 aaKnown RBP14.69□□□□□ -0.06
LIME1-202ENST00000444951 IGLV3-1P01715 115 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 IGHV3-13P01766 116 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 FAHP16930 419 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 KITLGP21583 273 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 MAP2K3P46734 347 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 TNK1Q13470 666 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 SEMA6DQ8NFY4 1073 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 RPS4Y2Q8TD47 263 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 IGFBPL1Q8WX77 278 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 PLEKHA1Q9HB21 404 aa14.69□□□□□ -0.06
LIME1-202ENST00000444951 IGLV3-9A0A075B6K5 115 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 SMAD7O15105 426 aaKnown RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 DHRS3O75911 302 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 ISG15P05161 165 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 NAT2P11245 290 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 CPEP16870 476 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 ZNF20P17024 532 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 GP2P55259 537 aaKnown RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 SNRPD2P62316 118 aaKnown RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 RPS25P62851 125 aaKnown RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 RIPPLY1Q0D2K3 151 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 TPBGQ13641 420 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 EFNB3Q15768 340 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 ZCCHC24Q8N2G6 241 aaKnown RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 OR14K1Q8NGZ2 314 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 GPR148Q8TDV2 347 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 DVL3Q92997 716 aaPredicted RBP14.68□□□□□ -0.06
LIME1-202ENST00000444951 MUL1Q969V5 352 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 FGGYQ96C11 551 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 PGLYRP3Q96LB9 341 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 CBLN4Q9NTU7 201 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 DHDHQ9UQ10 334 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 RHBDD3Q9Y3P4 386 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 V9GYS6 101 aa14.68□□□□□ -0.06
LIME1-202ENST00000444951 TRIM64CA6NLI5 447 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 ANKRD30BLA7E2S9 258 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 IQCF6A8MYZ5 107 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 M0R233 179 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 SPRY3O43610 288 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 CD8AP01732 235 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 HLA-DPB1P04440 258 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 DANCRP0C864 163 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 CCL1P22362 96 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 CA6P23280 308 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 GNALP38405 381 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 LIPAP38571 399 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 OR8B8Q15620 311 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 SSX1Q16384 188 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 MOGQ16653 247 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 SWI5Q1ZZU3 235 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 DMRTC1Q5HYR2 192 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 C20orf204Q6ZNR8 217 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 PHC2Q8IXK0 858 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 PLPP7Q8NBV4 271 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 OR8G5Q8NG78 346 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 PIGCQ92535 297 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 VRK1Q99986 396 aaPredicted RBP14.67□□□□□ -0.06
LIME1-202ENST00000444951 TRAF4Q9BUZ4 470 aaPredicted RBP14.67□□□□□ -0.06
LIME1-202ENST00000444951 PAPOLGQ9BWT3 736 aaKnown RBP14.67□□□□□ -0.06
LIME1-202ENST00000444951 TPK1Q9H3S4 243 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 PPP1R3EQ9H7J1 279 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 GPR160Q9UJ42 338 aa14.67□□□□□ -0.06
LIME1-202ENST00000444951 A0A1W2PPK0 400 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ZSCAN5BA6NJL1 495 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ZNF850A8MQ14 1090 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 H0YL77 283 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 OCM2P0CE71 109 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ZNF12P17014 697 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 DDOSTP39656 456 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 PTH2RP49190 550 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 EVX1P49640 407 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 ZNF81P51508 661 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 INSL4Q14641 139 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 YIF1BQ5BJH7 314 aa14.66□□□□□ -0.06
LIME1-202ENST00000444951 SYT6Q5T7P8 510 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms