RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 P2RY10O00398 339 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 SRSF10O75494 262 aaKnown RBP11.97□□□□□ -0.49
SSBP3-208ENST00000444533 NCR1O76036 304 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 SERPINA3P01011 423 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 OCM2P0CE71 109 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-208ENST00000444533 EEF1B2P24534 225 aaKnown RBP11.97□□□□□ -0.49
SSBP3-208ENST00000444533 CCR9P51686 369 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 TAS2R43P59537 309 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 ALKBH1Q13686 389 aaKnown RBP11.97□□□□□ -0.49
SSBP3-208ENST00000444533 CCDC58Q4VC31 144 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 TMEM255AQ5JRV8 349 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 WDR38Q5JTN6 314 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 RBM48Q5RL73 367 aaKnown RBP11.97□□□□□ -0.49
SSBP3-208ENST00000444533 FDX2Q6P4F2 183 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 KCTD8Q6ZWB6 473 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 PLPP7Q8NBV4 271 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 PELI1Q96FA3 418 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 MEGF10Q96KG7 1140 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 LYZL4Q96KX0 146 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 RTL8AQ9BWD3 113 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 FN3KRPQ9HA64 309 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 TRBV2A0A0J9YWF9 115 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 A6NLC8 198 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 CST4P01036 141 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 LIMS3P0CW19 117 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 LIMS4P0CW20 117 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF20P17024 532 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 COL8A2P25067 703 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 GIFP27352 417 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 CD200P41217 278 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 NR4A2P43354 598 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 TGM4P49221 684 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 ETV1P50549 477 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 OR5AK2Q8NH90 309 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 C10orf35Q96D05 121 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 MND1Q9BWT6 205 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 REG4Q9BYZ8 158 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.49
SSBP3-208ENST00000444533 NEK6Q9HC98 313 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF275Q9NSD4 429 aaPredicted RBP11.96□□□□□ -0.49
SSBP3-208ENST00000444533 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 HHLA2Q9UM44 414 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.49
SSBP3-208ENST00000444533 PRRC2AP48634 2157 aaKnown RBP11.96□□□□□ -0.5
SSBP3-208ENST00000444533 MAST4O15021 2626 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 IGHV4-30-2A0A087WSY4 118 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 LOC107986453A0A1B0GWG9 222 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 TRIM64BA6NI03 449 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF850A8MQ14 1090 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 LYNX1G3V0Z9 82 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 H0YL77 283 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 H7C1Q1 480 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 MLNRO43193 412 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 LILRA1O75019 489 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 GATBO75879 557 aaKnown RBP11.95□□□□□ -0.5
SSBP3-208ENST00000444533 NRASP01111 189 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 ISG15P05161 165 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 CDK1P06493 297 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 GRPP07492 148 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 LYNX1P0DP58 116 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 FOSL1P15407 271 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-208ENST00000444533 CHN2P52757 468 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 PRDX4Q13162 271 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 CLVS2Q5SYC1 327 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 PLCXD3Q63HM9 321 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 RPL22L1Q6P5R6 122 aaKnown RBP11.95□□□□□ -0.5
SSBP3-208ENST00000444533 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 GATAD2BQ8WXI9 593 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 PPP1R14AQ96A00 147 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 C18orf12Q96KH6 178 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 BPESC1Q9GZL8 116 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 CCDC90BQ9GZT6 254 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 TMEM106BQ9NUM4 274 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 SLC7A11Q9UPY5 501 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 V9GYS6 101 aa11.95□□□□□ -0.5
SSBP3-208ENST00000444533 CSMD1Q96PZ7 3565 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 hCG_1807616A0A1W2PRN6 198 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 ISPDA4D126 451 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 TMEM210A6NLX4 147 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 SMAD7O15105 426 aaKnown RBP11.94□□□□□ -0.5
SSBP3-208ENST00000444533 DENRO43583 198 aaKnown RBP11.94□□□□□ -0.5
SSBP3-208ENST00000444533 RGS10O43665 173 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 IGLV3-1P01715 115 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 FAHP16930 419 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 CCL1P22362 96 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 ANOS1P23352 680 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms