RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PLXND1Q9Y4D7 1925 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 BTBD17A6NE02 478 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 DCTN6O00399 190 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 SERPINA5P05154 406 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 MTCP1P56278 107 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 SLC17A1Q14916 467 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 Q6ZTK2 550 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 HSD17B13Q7Z5P4 300 aaPredicted RBP9.46□□□□□ -0.9
TOP3B-210ENST00000444502 ZNF679Q8IYX0 411 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 FLVCR1-AS1Q8TAF5 88 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 GBF1Q92538 1859 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 NCOR2Q9Y618 2525 aa9.46□□□□□ -0.9
TOP3B-210ENST00000444502 TRGV5A0A0B4J1U4 118 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 TRAV17A0A0B4J275 112 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 A0A1B0GV50 99 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 ZNF814B7Z6K7 855 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 IRF2P14316 349 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CTLA4P16410 223 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 FXYD4P59646 89 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 DOC2BQ14184 412 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 INO80EQ8NBZ0 244 aaPredicted RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 GLYATL2Q8WU03 294 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 SELENOIQ9C0D9 397 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 LOC107986453A0A1B0GWG9 222 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 NKX2-8O15522 239 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CSF1P09603 554 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 NDUFA6P56556 154 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MRPS10P82664 201 aaKnown RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 GUCA2AQ02747 115 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MRGPREQ86SM8 312 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 BPIFB2Q8N4F0 458 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 IL1F10Q8WWZ1 152 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 LRFN5Q96NI6 719 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PRRX2Q99811 253 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 UCK1Q9HA47 277 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 HIF3AQ9Y2N7 669 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 DOPEY2Q9Y3R5 2298 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 TRAV1-2A0A0B4J238 106 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 TUBAL3A6NHL2 446 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 GABARAPH6UMI1 98 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 GFRA3O60609 400 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 VAMP5O95183 116 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MEOX1P50221 254 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PRSS12P56730 875 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CACNA1DQ01668 2161 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MESTQ5EB52 335 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PABPC1L2AQ5JQF8 200 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 WDR38Q5JTN6 314 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 TRAPPC6BQ86SZ2 158 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 FAM71CQ8NEG0 241 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 GJC3Q8NFK1 279 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 OR51S1Q8NGJ8 323 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 SLAMF9Q96A28 289 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 SCMH1Q96GD3 660 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 KCNK15Q9H427 330 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 HRASLSQ9HDD0 168 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 IL17BQ9UHF5 180 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 ICAM5Q9UMF0 924 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 MCRIP1C9JLW8 97 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CYTIPO60759 359 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 FCGR2AP12318 317 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CLN3Q13286 438 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 CEACAM16Q2WEN9 425 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 NHLRC3Q5JS37 347 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 HACD4Q5VWC8 232 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 LDLRAD3Q86YD5 345 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PLPP5Q8NEB5 264 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 OR52N5Q8NH56 324 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 ARL11Q969Q4 196 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 PPP1R3EQ9H7J1 279 aa9.45□□□□□ -0.9
TOP3B-210ENST00000444502 OR2M5A3KFT3 312 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 SLC22A20A6NK97 555 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 NDUFB7P17568 137 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 DSCR4P56555 118 aaPredicted RBP9.44□□□□□ -0.9
TOP3B-210ENST00000444502 BATFQ16520 125 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 GSG1Q2KHT4 349 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 SLC23A3Q6PIS1 610 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 TMEM200AQ86VY9 491 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 FAM173AQ9BQD7 235 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 HAO2Q9NYQ3 351 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 PLXNA4Q9HCM2 1894 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 ZNF891A8MT65 544 aaPredicted RBP9.44□□□□□ -0.9
TOP3B-210ENST00000444502 PRAF2O60831 178 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 PATE4P0C8F1 98 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 DLX5P56178 289 aa9.44□□□□□ -0.9
TOP3B-210ENST00000444502 NANOS3P60323 173 aaKnown RBP9.44□□□□□ -0.9
TOP3B-210ENST00000444502 S100A10P60903 97 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms