RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ATPAF1Q5TC12 328 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-203ENST00000442830 SLC16A9Q7RTY1 509 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 CPLX4Q7Z7G2 160 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 PAPD5Q8NDF8 572 aaKnown RBP11.38□□□□□ -0.59
PTPRE-203ENST00000442830 OR1M1Q8NGA1 313 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 MED30Q96HR3 178 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 REEP6Q96HR9 211 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 RTL8AQ9BWD3 113 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 MPC1Q9Y5U8 109 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-203ENST00000442830 hCG_38984A0A1B0GV85 526 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 DHRS12A0PJE2 317 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 C5orf63A6NC05 138 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 M0R1W7 72 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 TSPAN9O75954 239 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 IGHV4-59P01825 116 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 SPI1P17947 270 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 RPS27P42677 84 aaKnown RBP11.37□□□□□ -0.59
PTPRE-203ENST00000442830 MNAT1P51948 309 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 BLMHQ13867 455 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 EIF2B1Q14232 305 aaKnown RBP11.37□□□□□ -0.59
PTPRE-203ENST00000442830 WDR38Q5JTN6 314 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 ASPHD2Q6ICH7 369 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 WDR82Q6UXN9 313 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 OR6K6Q8NGW6 343 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 RNF133Q8WVZ7 376 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRE-203ENST00000442830 INTS14Q96SY0 518 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 ELAC2Q9BQ52 826 aaKnown RBP11.37□□□□□ -0.59
PTPRE-203ENST00000442830 PAPOLGQ9BWT3 736 aaKnown RBP11.37□□□□□ -0.59
PTPRE-203ENST00000442830 TSSK6Q9BXA6 273 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 NMNAT2Q9BZQ4 307 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 MUC13Q9H3R2 512 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 MAGIXQ9H6Y5 334 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
PTPRE-203ENST00000442830 SLC2A1P11166 492 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 PAICSP22234 425 aaKnown RBP11.36□□□□□ -0.59
PTPRE-203ENST00000442830 CRMP1Q14194 572 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 OR9Q2Q8NGE9 314 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 OR51L1Q8NGJ5 315 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 OR9Q1Q8NGQ5 310 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 CDRT15Q96T59 188 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 BTBD10Q9BSF8 475 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 DCTN5Q9BTE1 182 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 DGCR6LQ9BY27 220 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 FAM234AQ9H0X4 552 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 RASSF4Q9H2L5 321 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 METTL8Q9H825 291 aaKnown RBP11.36□□□□□ -0.59
PTPRE-203ENST00000442830 NIPAL2Q9H841 368 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 RAB18Q9NP72 206 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 CMC2Q9NRP2 79 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 N6AMT1Q9Y5N5 214 aa11.36□□□□□ -0.59
PTPRE-203ENST00000442830 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 NPFFO15130 113 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 MAGEA2P43356 314 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 TGM4P49221 684 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 GSK3AP49840 483 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 UBE2E1P51965 193 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 CAV3P56539 151 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 SRSF4Q08170 494 aaKnown RBP11.35□□□□□ -0.59
PTPRE-203ENST00000442830 STUMQ69YW2 141 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF770Q6IQ21 691 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-203ENST00000442830 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-203ENST00000442830 ARHGAP24Q8N264 748 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 AQP11Q8NBQ7 271 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 OR6N2Q8NGY6 317 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 PGAM5Q96HS1 289 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 CCL13Q99616 98 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 TAGLN3Q9UI15 199 aa11.35□□□□□ -0.59
PTPRE-203ENST00000442830 TRBV23-1A0A0A0MS06 115 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 A0A1W2PPH5 198 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 ANKRD61A6NGH8 418 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 RNASEK-C17orf49H0YIS7 233 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 SNX3O60493 162 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 GASTP01350 101 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 H2BFMP0C1H6 154 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 HOXB6P17509 224 aaKnown RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 GSTT1P30711 240 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF121P58317 390 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 MXRA7P84157 204 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 AANATQ16613 207 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 MICAQ29983 383 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 CD300LDQ6UXZ3 194 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 Q6ZSV7 163 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 FAM57BQ71RH2 274 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 PRSS45Q7RTY3 260 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 ERI1Q8IV48 349 aaKnown RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 C11orf53Q8IXP5 236 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 OR8D4Q8NGM9 314 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms