RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ACOD1A6NK06 481 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ANKRD30BLA7E2S9 258 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 LOC110117498-PIK3R3F6TDL0 507 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 TRAPPC2LH3BP13 241 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 SLC16A6O15403 523 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 WBP4O75554 376 aaKnown RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 RPP14O95059 124 aaKnown RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 CLIC3O95833 236 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 WNT2P09544 360 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 OR2T7P0C7T2 308 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 CD80P33681 288 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 MTNR1AP48039 350 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 EGR3Q06889 387 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF154Q13106 437 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 PRDX4Q13162 271 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 TMED1Q13445 227 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 SMN1Q16637 294 aaKnown RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 TP53I3Q53FA7 332 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 LIPNQ5VXI9 398 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 PEG10Q86TG7 708 aaKnown RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ELMOD2Q8IZ81 293 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 PRSS35Q8N3Z0 413 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 DEFB108BQ8NET1 73 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 OR2T27Q8NH04 317 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 RORBQ92753 470 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 STMN2Q93045 179 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 RAB39BQ96DA2 213 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 MNTQ99583 582 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF649Q9BS31 505 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 PAPOLGQ9BWT3 736 aaKnown RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 BEX2Q9BXY8 128 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 SHARPINQ9H0F6 387 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 MMP26Q9NRE1 261 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 C1orf123Q9NWV4 160 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 NKX1-2Q9UD57 310 aaPredicted RBP11.1□□□□□ -0.63
LINC00399-201ENST00000439008 R4GMQ9 66 aa11.1□□□□□ -0.63
LINC00399-201ENST00000439008 A6NIN4 97 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 H3BSH0 61 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 P2RY10O00398 339 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PHF1O43189 567 aaPredicted RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 CST4P01036 141 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 LHBP01229 141 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 FAHP16930 419 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 CFL1P23528 166 aaKnown RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PSMB10P40306 273 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 KIR3DL2P43630 455 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PAX2Q02962 417 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 POU4F2Q12837 409 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 Q6ZSR3 168 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 GLCCI1Q86VQ1 547 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 CATSPERDQ86XM0 798 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 KLBQ86Z14 1044 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 YIPF7Q8N8F6 280 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 CSNK2A3Q8NEV1 391 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 OR5P3Q8WZ94 311 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PIGCQ92535 297 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 RFKQ969G6 155 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 ERGIC1Q969X5 290 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 TMPRSS13Q9BYE2 586 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 TLNRD1Q9H1K6 362 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 ACOXLQ9NUZ1 547 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 SMPD3Q9NY59 655 aaPredicted RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 OPN4Q9UHM6 478 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 OR52A1Q9UKL2 312 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 GTF2A1LQ9UNN4 478 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 EXOGQ9Y2C4 368 aaKnown RBP11.09□□□□□ -0.63
LINC00399-201ENST00000439008 MYRFQ9Y2G1 1151 aa11.09□□□□□ -0.63
LINC00399-201ENST00000439008 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 IGHV3OR15-7A0A075B7D8 119 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 TRAV20A0A0B4J274 112 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 METTL15A6NJ78 407 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 PPIAL4DF5H284 164 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 PHYHO14832 338 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 FSTL3O95633 263 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 DBTP11182 482 aaKnown RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 OR12D2P58182 307 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 ADARB1P78563 741 aaKnown RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 GABPB1Q06547 395 aaPredicted RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 ODF4Q2M2E3 257 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 FAM76BQ5HYJ3 339 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 ZNF841Q6ZN19 808 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms