RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TXNDC12O95881 172 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 CYC1P08574 325 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 AGTR1P30556 359 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 MLF1P58340 268 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 PLEKHN1Q494U1 663 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 SARAFQ96BY9 339 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 MUCL1Q96DR8 90 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 UCN2Q96RP3 112 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 NELFAQ9H3P2 528 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OBP2BQ9NPH6 170 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 TAS2R5Q9NYW4 299 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 ELF5Q9UKW6 265 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 TMEM82A0PJX8 343 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLC17A2O00624 439 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 SHOXO15266 292 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 CHRM2P08172 466 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ACSM1Q08AH1 577 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 DCAF10Q5QP82 559 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 EXOSC6Q5RKV6 272 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 C17orf82Q86X59 251 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 IGKV1D-42A0A075B6H8 117 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 IGHV1-45A0A0A0MS14 117 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ADAM11O75078 769 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 MPC2O95563 127 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 FTH1P19P0C7X4 201 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 LIFP15018 202 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 CNR1P21554 472 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 MEOX1P50221 254 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 TAGLNQ01995 201 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 TMPRSS7Q7RTY8 843 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 CDC20BQ86Y33 519 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ST7LQ8TDW4 575 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLCO5A1Q9H2Y9 848 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 HEXA-AS1Q9H8Q6 139 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 FRRS1LQ9P0K9 344 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 KCNS2Q9ULS6 477 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLC22A20A6NK97 555 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF891A8MT65 544 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR8U9P0C7N5 309 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 UBBP0CG47 229 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 FAHP16930 419 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 IL11P20809 199 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 IDH3GP51553 393 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 PCK2Q16822 640 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 SFRP5Q5T4F7 317 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 BATF2Q8N1L9 274 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 RFLNBQ8N5W9 214 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 GPR137Q96N19 417 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 TRIB1Q96RU8 372 aa10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 VRK1Q99986 396 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-202ENST00000438773 ROS1P08922 2347 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 TRAV17A0A0B4J275 112 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 TSPAN15O95858 294 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 CAMLGP49069 296 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 CAV2P51636 162 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 LGALSLQ3ZCW2 172 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 TMEM65Q6PI78 240 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 ARL11Q969Q4 196 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 CLCC1Q96S66 551 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 KLF4O43474 513 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 ATG12O94817 140 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 UCNP55089 124 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 SYT3Q9BQG1 590 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 GHITMQ9H3K2 345 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 RBP2P50120 134 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 CCDC54Q8NEL0 328 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR10AC1Q8NH08 325 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 AIFM2Q9BRQ8 373 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 LHX6Q9UPM6 363 aa10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 UBE2J1Q9Y385 318 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC9-202ENST00000438773 PLSCR5A0PG75 271 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 HSPB6O14558 160 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 PATE4P0C8F1 98 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 GAAP10253 952 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 OMGP23515 440 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 GABRA4P48169 554 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 GUCA2AQ02747 115 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 PCOLCEQ15113 449 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 ADAM5Q6NVV9 412 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 MEX3BQ6ZN04 569 aaKnown RBP10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 GPX7Q96SL4 187 aaPredicted RBP10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 LUZP4Q9P127 313 aa10.27□□□□□ -0.76
TRAPPC9-202ENST00000438773 GMDSO60547 372 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 BPNT1O95861 308 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 LPLP06858 475 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 AANATQ16613 207 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 ST3GAL2Q16842 350 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 RSPO4Q2I0M5 234 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 RTL6Q6ICC9 239 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms