RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLC25A37Q9NYZ2 338 aa2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 CLCF1Q9UBD9 225 aa2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 NUFIP1Q9UHK0 495 aaKnown RBP2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 TCHHQ07283 1943 aa2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZANQ9Y493 2812 aa2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 ARHGAP21Q5T5U3 1957 aa2.1□□□□□ -2.07
HMGB3P12-201ENST00000438745 TENM3Q9P273 2699 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 SCN1AP35498 2009 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 TRPM6Q9BX84 2022 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR5K4A6NMS3 321 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 GABRR3A8MPY1 467 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 C12orf71A8MTZ7 269 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 ANKRD63C9JTQ0 380 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 E7EQ34 232 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 FCMRO60667 390 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 TGM6O95932 706 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 ASS1P00966 412 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 GAPDHP04406 335 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 RHOCP08134 193 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 TBPP20226 339 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 CNR1P21554 472 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 NSG1P42857 185 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 DCDP81605 110 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 RAD51Q06609 339 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 PHYHD1Q5SRE7 291 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 CLEC2AQ6UVW9 174 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 CERS6Q6ZMG9 384 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 COX15Q7KZN9 410 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 PIANPQ8IYJ0 282 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 TPRX1Q8N7U7 411 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM83FQ8NEG4 500 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR51G1Q8NGK1 321 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR1L6Q8NGR2 347 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 DTX3LQ8TDB6 740 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 BLOC1S5Q8TDH9 187 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 PYROXD1Q8WU10 500 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 ACOT11Q8WXI4 607 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM104AQ969W3 186 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 TM4SF19Q96DZ7 209 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 PLEKHA8Q96JA3 519 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 CNN2Q99439 309 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 MRM3Q9HC36 420 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLCO1B3Q9NPD5 702 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 ADAP2Q9NPF8 381 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 CALYQ9NYX4 217 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 DHCR7Q9UBM7 475 aaKnown RBP2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 HS3ST2Q9Y278 367 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 WSB1Q9Y6I7 421 aa2.09□□□□□ -2.07
HMGB3P12-201ENST00000438745 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 GOLGA8IPA6NC78 632 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 GOLGA8JA6NMD2 632 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 PDZK1P1A8MUH7 402 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 C11orf94C9JXX5 98 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 CDC7O00311 574 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 PPP1R2P9O14990 202 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR7A10O76100 309 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 LCA5LO95447 670 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SERPINA3P01011 423 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SERPINA7P05543 415 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 IVLP07476 585 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 ATP1B2P14415 290 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 ETS2P15036 469 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 HPGDP15428 266 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 CRISP2P16562 243 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 TNNI1P19237 187 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 CMA1P23946 247 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 TAGLN2P37802 199 aaKnown RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 CCR8P51685 355 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 LOXL1Q08397 574 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 MRPL28Q13084 256 aaKnown RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 RFX4Q33E94 735 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 C1orf185Q5T7R7 199 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 FRMPD2BQ6IN97 320 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 Q6P435 159 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 TRIM40Q6P9F5 258 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SHISA6Q6ZSJ9 500 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF786Q8N393 782 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 C12orf29Q8N999 325 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 Q8N9L7 120 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SNX31Q8N9S9 440 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 MDS2Q8NDY4 140 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 NPBQ8NG41 125 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR4F15Q8NGB8 312 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR11G2Q8NGC1 345 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR5B17Q8NGF7 314 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR2G2Q8NGZ5 317 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 MARCH1Q8TCQ1 289 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 HSFY1Q96LI6 401 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SERPINB11Q96P15 392 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 GSDMAQ96QA5 445 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 NPY6RQ99463 290 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 UTP23Q9BRU9 249 aaKnown RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SLC39A3Q9BRY0 314 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 RIOK2Q9BVS4 552 aaKnown RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 ULBP1Q9BZM6 244 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 DEFB127Q9H1M4 99 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 METTL17Q9H7H0 456 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF226Q9NYT6 803 aa2.08□□□□□ -2.08
HMGB3P12-201ENST00000438745 SPATA7Q9P0W8 599 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms