RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FDX2Q6P4F2 183 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 MAPK1IP1LQ8NDC0 245 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 SEMA6DQ8NFY4 1073 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 SGCDQ92629 289 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
SNRPB-202ENST00000438552 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
SNRPB-202ENST00000438552 NOP16Q9Y3C1 178 aaKnown RBP13.67□□□□□ -0.22
SNRPB-202ENST00000438552 A0A096LNT2 108 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 A0A1B0GVI7 797 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 VWC2LB2RUY7 222 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 LMX1BO60663 402 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 UBCP0CG48 685 aaKnown RBP13.66□□□□□ -0.22
SNRPB-202ENST00000438552 TNFRSF1AP19438 455 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 CCL1P22362 96 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 GIFP27352 417 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 CD200P41217 278 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 NR4A2P43354 598 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 PRDX4Q13162 271 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 MAB21L1Q13394 359 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 MED21Q13503 144 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 HFEQ30201 348 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 PRAMEF6Q5VXH4 476 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 XAF1Q6GPH4 301 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 DOK3Q7L591 496 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 MOGAT3Q86VF5 341 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 PLPP7Q8NBV4 271 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 CCL17Q92583 94 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 COX4I2Q96KJ9 171 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 TMUB1Q9BVT8 246 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 DLL4Q9NR61 685 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 PPP1R3CQ9UQK1 317 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 PIGLQ9Y2B2 252 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
SNRPB-202ENST00000438552 V9GYS6 101 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 F8P00451 2351 aa13.66□□□□□ -0.22
SNRPB-202ENST00000438552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 ZNF816-ZNF321PA0A0X1KG74 233 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 ZNF850A8MQ14 1090 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 PPIHO43447 177 aaKnown RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 SYT7O43581 403 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 MTRF1O75570 445 aaKnown RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 CST4P01036 141 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 CD99P14209 185 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 C21orf33P30042 268 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 GPR6P46095 362 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 GTF2A1P52655 376 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 GBX2P52951 348 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 RIPPLY1Q0D2K3 151 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 ALKBH1Q13686 389 aaKnown RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 RDH10Q8IZV5 341 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 OR14K1Q8NGZ2 314 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 OR8S1Q8NH09 359 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 OR52N1Q8NH53 320 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 ZNF420Q8TAQ5 688 aaPredicted RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 PIGCQ92535 297 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 GCM1Q9NP62 436 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 CHCHD3Q9NX63 227 aaKnown RBP13.65□□□□□ -0.22
SNRPB-202ENST00000438552 SCN3BQ9NY72 215 aa13.65□□□□□ -0.22
SNRPB-202ENST00000438552 IGHV4-61A0A0C4DH41 118 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 LOC100289279A0A1B0GTE1 492 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 A6NIN4 97 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 OR4C45A6NMZ5 311 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 CLDN25C9JDP6 229 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 CDK1P06493 297 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 CCDC159P0C7I6 412 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 CCR9P51686 369 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 CSNK2BP67870 215 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 MPPED2Q15777 294 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 DMRTC1Q5HYR2 192 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 Q6ZSR3 168 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 WDR86Q86TI4 376 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 KLBQ86Z14 1044 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ZDHHC23Q8IYP9 409 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ZNF676Q8N7Q3 588 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 OR10AC1Q8NH08 325 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 HPSE2Q8WWQ2 592 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ITPKCQ96DU7 683 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 FGF23Q9GZV9 251 aaPredicted RBP13.64□□□□□ -0.23
SNRPB-202ENST00000438552 Q9H521 79 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 NARFLQ9H6Q4 476 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 PLEKHA1Q9HB21 404 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 TMEM106BQ9NUM4 274 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 UFSP2Q9NUQ7 469 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ENPP5Q9UJA9 477 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 MPC1Q9Y5U8 109 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ACANP16112 2415 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 MED13LQ71F56 2210 aa13.64□□□□□ -0.23
SNRPB-202ENST00000438552 ANXA2P2A6NMY6 339 aa13.63□□□□□ -0.23
SNRPB-202ENST00000438552 MYL12BO14950 172 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms