RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 A0A1W2PQD3 144 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM218A2RU14 115 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 SHISA8B8ZZ34 492 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PRSS44E7EML9 344 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RNASEK-C17orf49H0YIS7 233 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TNFSF12O43508 249 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 MRPL33O75394 65 aaKnown RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OR2J2O76002 312 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TXNDC12O95881 172 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 BGLAPP02818 100 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GP1BAP07359 652 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ASAH2BP0C7U1 165 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CBR1P16152 277 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GLB1P16278 677 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 FAHP16930 419 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ENPP1P22413 925 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NKX2-1P43699 371 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 IDH3GP51553 393 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CARD18P57730 90 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TLE4Q04727 773 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 SHBQ15464 509 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ABHD17BQ5VST6 288 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 FAM109BQ6ICB4 259 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZSCAN4Q8NAM6 433 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OR2G3Q8NGZ4 309 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RTN4IP1Q8WWV3 396 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 HAS2Q92819 552 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NIPSNAP3BQ9BS92 247 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 FANCFQ9NPI8 374 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NIT2Q9NQR4 276 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 HEATR5BQ9P2D3 2071 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PTPRDP23468 1912 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 FIGNL2A6NMB9 653 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 METTL12A8MUP2 240 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 UMAD1C9J7I0 102 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RER1O15258 196 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 DHHO43323 396 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ADRA2CP18825 462 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PIGPP57054 158 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 IKZF1Q13422 519 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RAB32Q13637 225 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF658BQ4V348 819 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 LINC01590Q5TEZ4 76 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 C9orf135Q5VTT2 229 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF660Q6AZW8 331 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PRSS54Q6PEW0 395 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF813Q6ZN06 617 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OVCH2Q7RTZ1 564 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NAA40Q86UY6 237 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM217Q8N7C4 229 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF321PQ8N8H1 164 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 WDSUB1Q8N9V3 476 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF485Q8NCK3 441 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OR1L3Q8NH93 324 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CPT1CQ8TCG5 803 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 NPDC1Q9NQX5 325 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RASL12Q9NYN1 266 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PURGQ9UJV8 347 aaKnown RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 MCTS1Q9ULC4 181 aaKnown RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GPR31O00270 319 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 ADAP1O75689 374 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 CST4P01036 141 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 GLULP15104 373 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 RAC2P15153 192 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 THBS4P35443 961 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 PPIAP62937 165 aaKnown RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 KISS1Q15726 138 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 NHLRC3Q5JS37 347 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 C16orf47Q6ZP98 133 aaPredicted RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 DPPA2Q7Z7J5 298 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 RPS19BP1Q86WX3 136 aaKnown RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF784Q8NCA9 323 aaPredicted RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 PTPMT1Q8WUK0 201 aaPredicted RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 MITD1Q8WV92 249 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 ARL5BQ96KC2 179 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 PRRX2Q99811 253 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 OCSTAMPQ9BR26 566 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 FN3KRPQ9HA64 309 aa5.96□□□□□ -1.45
CSDE1-205ENST00000438362 STRAPQ9Y3F4 350 aaKnown RBP5.96□□□□□ -1.45
CSDE1-205ENST00000438362 A0A1W2PPC1 479 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 HSPB6O14558 160 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 OR2A4O95047 310 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 S100A8P05109 93 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 IL9P15248 144 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 GLRA1P23415 457 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 APLNRP35414 380 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 RPUSD3Q6P087 351 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 TMEM182Q6ZP80 229 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 RPS4Y2Q8TD47 263 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 NANOS1Q8WY41 292 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 OR2A7Q96R45 310 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 AMELYQ99218 206 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 DNAJB11Q9UBS4 358 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 TNFSF18Q9UNG2 199 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 PLXNA3P51805 1871 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF646O15015 1829 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 TRBV5-7A0A0A0MS05 114 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 FAM221AA4D161 298 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms