RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NR2C2APQ86WQ0 139 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 CROCCP3Q8IVE0 287 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 OR51A2Q8NGJ7 313 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 SLC30A2Q9BRI3 323 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.74■□□□□ 0.75
CPSF4-204ENST00000436336 ANXA2P2A6NMY6 339 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 NCR1O76036 304 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 BDKRB2P30411 391 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 CAV3P56539 151 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 OR10A3P58181 314 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 PSG7Q13046 419 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 NKAIN3Q8N8D7 197 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 PIGTQ969N2 578 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 GFI1Q99684 422 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 BARHL1Q9BZE3 327 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 TMEM138Q9NPI0 162 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 V9GY05 133 aa19.74■□□□□ 0.75
CPSF4-204ENST00000436336 A0A0G2JK05 382 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 NOTOA8MTQ0 251 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 CST4P01036 141 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 ERCC1P07992 297 aaPredicted RBP19.73■□□□□ 0.75
CPSF4-204ENST00000436336 MPV17P39210 176 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 KIR2DL3P43628 341 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 UBE2V2Q15819 145 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 TECTBQ96PL2 329 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 SLIRPQ9GZT3 109 aaKnown RBP19.73■□□□□ 0.75
CPSF4-204ENST00000436336 RHBDD3Q9Y3P4 386 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 IQCF6A8MYZ5 107 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 GMDSO60547 372 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 NRASP01111 189 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 CD3EP07766 207 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 ATF1P18846 271 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 KITLGP21583 273 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 FABP6P51161 128 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 SFXN4Q6P4A7 337 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 OR5AS1Q8N127 324 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 UBASH3BQ8TF42 649 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 TMEM171Q8WVE6 324 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 PIGCQ92535 297 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 GPR173Q9NS66 373 aa19.73■□□□□ 0.75
CPSF4-204ENST00000436336 IGKV1-9A0A0C4DH69 117 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 ANKRD30BLA7E2S9 258 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 ALDOBP05062 364 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 ZNF250P15622 560 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 CNN3Q15417 329 aaKnown RBP19.72■□□□□ 0.75
CPSF4-204ENST00000436336 GLT8D1Q68CQ7 371 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 BHLHE23Q8NDY6 225 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 DNAAF1Q8NEP3 725 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 PAPOLGQ9BWT3 736 aaKnown RBP19.72■□□□□ 0.75
CPSF4-204ENST00000436336 CRIM1Q9NZV1 1036 aa19.72■□□□□ 0.75
CPSF4-204ENST00000436336 MRPL15Q9P015 296 aaKnown RBP19.72■□□□□ 0.75
CPSF4-204ENST00000436336 PLEKHB1Q9UF11 243 aaPredicted RBP19.72■□□□□ 0.75
CPSF4-204ENST00000436336 PURGQ9UJV8 347 aaKnown RBP19.72■□□□□ 0.75
CPSF4-204ENST00000436336 C19orf84I3L1E1 186 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 OCMP0CE72 109 aaPredicted RBP19.71■□□□□ 0.75
CPSF4-204ENST00000436336 IGFBP2P18065 325 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ADAM5Q6NVV9 412 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 SYNPRQ8TBG9 265 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ZNF442Q9H7R0 627 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 NEK6Q9HC98 313 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 CA10Q9NS85 328 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ATP23Q9Y6H3 246 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 PMF1-BGLAPU3KQ54 211 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ANKHD1Q8IWZ3 2542 aaKnown RBP19.71■□□□□ 0.75
CPSF4-204ENST00000436336 MAGEB3O15480 346 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 TMEM127O75204 238 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 CD37P11049 281 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ZNF404Q494X3 552 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 TMEM255AQ5JRV8 349 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 DDI2Q5TDH0 399 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 VHLLQ6RSH7 139 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 DMRTC2Q8IXT2 367 aaPredicted RBP19.71■□□□□ 0.75
CPSF4-204ENST00000436336 OR52N4Q8NGI2 321 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 SPSB1Q96BD6 273 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 FOXRED1Q96CU9 486 aaPredicted RBP19.71■□□□□ 0.75
CPSF4-204ENST00000436336 NXF2Q9GZY0 626 aaKnown RBP19.71■□□□□ 0.75
CPSF4-204ENST00000436336 POU2F3Q9UKI9 436 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 FZR1Q9UM11 496 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 MPC1Q9Y5U8 109 aa19.71■□□□□ 0.75
CPSF4-204ENST00000436336 ADGRG4Q8IZF6 3080 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 IFITM5A6NNB3 132 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 ZNF850A8MQ14 1090 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 SHISA9B4DS77 424 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 HCKP08631 526 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 RNF224P0DH78 156 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 PRF1P14222 555 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 AZGP1P25311 298 aaKnown RBP19.7■□□□□ 0.74
CPSF4-204ENST00000436336 SRSF1Q07955 248 aaKnown RBP eCLIP19.7■□□□□ 0.744e-7■■■■□ 23.2
CPSF4-204ENST00000436336 PRDX4Q13162 271 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 MSMPQ1L6U9 139 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 MOB3CQ70IA8 216 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 CDH26Q8IXH8 852 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 ZDHHC23Q8IYP9 409 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 FAM222BQ8WU58 562 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 AP3S1Q92572 193 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 GPR160Q9UJ42 338 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 CMAHPQ9Y471 501 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 RNF115Q9Y4L5 304 aa19.7■□□□□ 0.74
CPSF4-204ENST00000436336 KLF2Q9Y5W3 355 aaPredicted RBP19.7■□□□□ 0.74
CPSF4-204ENST00000436336 A3GALT2U3KPV4 340 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms