RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PBOV1Q9GZY1 135 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 NPAP1Q9NZP6 1156 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 CEACAM16Q2WEN9 425 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 ANGPTL6Q8NI99 470 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 ARRDC2Q8TBH0 407 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 CXorf58Q96LI9 332 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 LURAP1Q96LR2 239 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 METTL12A8MUP2 240 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 DCTN6O00399 190 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 HSBP1O75506 76 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 NPPBP16860 134 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 VAMP3Q15836 100 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 MBNL1Q9NR56 388 aaKnown RBP10.11□□□□□ -0.79
SCN4A-201ENST00000435607 PRDM4Q9UKN5 801 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 LANCL1O43813 399 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 LIMS3P0CW19 117 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 LIMS4P0CW20 117 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 HTN1P15515 57 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 THBS4P35443 961 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 OR3A4PP47883 348 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 RNF212Q495C1 297 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 LIPNQ5VXI9 398 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 ANKRD34AQ69YU3 496 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 OR1F12Q8NHA8 337 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 ADTRPQ96IZ2 230 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 SLC7A10Q9NS82 523 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 KNL1Q8NG31 2342 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 C9orf172C9J069 976 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 HAX1O00165 279 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 GPR31O00270 319 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 UBE2L6O14933 153 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 RPUSD3Q6P087 351 aaKnown RBP10.11□□□□□ -0.79
SCN4A-201ENST00000435607 CCDC190Q86UF4 302 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 OR51S1Q8NGJ8 323 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 OR2F2O95006 317 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 OR2F1Q13607 317 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 ADPRHL1Q8NDY3 354 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 NOXO1Q8NFA2 376 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 C14orf79Q96F83 325 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 UBR2Q8IWV8 1755 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TRABD2BA6NFA1 517 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TMEM202A6NGA9 273 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PLPP1O14494 284 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 LRP3O75074 770 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ST6GAL1P15907 406 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PIGPP57054 158 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 NHLH1Q02575 133 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 NHLH2Q02577 135 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 NECAP1Q8NC96 275 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 FOXB1Q99853 325 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 GHITMQ9H3K2 345 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 SIRT5Q9NXA8 310 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 SNX11Q9Y5W9 270 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TCRBV3S1A0A5B6 114 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PLAURQ03405 335 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 BTN1A1Q13410 526 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 NCR3LG1Q68D85 454 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZFP62Q8NB50 900 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 SP1P08047 785 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF121P58317 390 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TCTN3Q6NUS6 607 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 MED30Q96HR3 178 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 HAPLN2Q9GZV7 340 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 SLC45A2Q9UMX9 530 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 LIPAP38571 399 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 KIAA0141Q14154 515 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 SPCS2Q15005 226 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PNLIPRP3Q17RR3 467 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF534Q76KX8 674 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 AMIGO3Q86WK7 504 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ADGRG7Q96K78 797 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 GABRG3Q99928 467 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 CABLES2Q9BTV7 478 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 POMT1Q9Y6A1 747 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 UMAD1C9J7I0 102 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 H0Y8X5 98 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 M0R296 226 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 Q6ZN92 141 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 GDF2Q9UK05 429 aaPredicted RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 TMEM235A6NFC5 223 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 RFPL4AA6NLU0 287 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 RFPL4AL1F8VTS6 287 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 NME2P1O60361 137 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 ZDHHC11BP0C7U3 371 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 HIST1H1EP10412 219 aaKnown RBP10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PFN3P60673 137 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 XKR7Q5GH72 579 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PRSS3P2Q8NHM4 247 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
SCN4A-201ENST00000435607 MON2Q7Z3U7 1717 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF318Q5VUA4 2279 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 POM121BA6NF01 834 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ADAM20O43506 726 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms