RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MICBQ29980 383 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 GFOD2Q3B7J2 385 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 MAML2Q8IZL2 1156 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 TMEM123Q8N131 208 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 INO80EQ8NBZ0 244 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 TMEM104Q8NE00 496 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 PXT1Q8NFP0 134 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 OR51T1Q8NGJ9 327 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 MARCH1Q8TCQ1 289 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 NABP1Q96AH0 204 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 CPNE2Q96FN4 548 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 SGCZQ96LD1 299 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 CXorf58Q96LI9 332 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 VRK1Q99986 396 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 ULBP2Q9BZM5 246 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 DNTTIP1Q9H147 329 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 BANF2Q9H503 90 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 FSCN3Q9NQT6 498 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 ZNF230Q9UIE0 474 aaPredicted RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 SPEF1Q9Y4P9 236 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 KCNMB2Q9Y691 235 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 LOC100509620A0A075B734 347 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 DHRS7CA6NNS2 312 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 KLF7O75840 302 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 SFT2D2O95562 160 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 HPP00738 406 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 GP1BAP07359 652 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CELA2AP08217 269 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 ICAM2P13598 275 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 AMY2BP19961 511 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 KLK2P20151 261 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 FPR2P25090 351 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SRD5A2P31213 254 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 OTX1P32242 354 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 ECI1P42126 302 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 STARP49675 285 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 TMEM50BP56557 158 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 KISS1Q15726 138 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 PLAC9Q5JTB6 97 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 JMJD6Q6NYC1 403 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 KCTD9Q7L273 389 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 C20orf196Q8IYI0 205 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 OR1S1Q8NH92 325 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 PPP1R1CQ8WVI7 109 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CCDC120Q96HB5 630 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 LYZL4Q96KX0 146 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SPACA5Q96QH8 159 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SOX7Q9BT81 388 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 RBM24Q9BX46 236 aaKnown RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 TM2D1Q9BX74 207 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 NMES1Q9C002 83 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CHST5Q9GZS9 411 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 PROK2Q9HC23 129 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SLC39A1Q9NY26 324 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 TNRC6BQ9UPQ9 1833 aaKnown RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 RALGAPA1Q6GYQ0 2036 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 IGKV1-9A0A0C4DH69 117 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 B4E171 279 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 F5H5K5 113 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 M0R135 149 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CCSO14618 274 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 P04436 131 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CST2P09228 141 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 LIPCP11150 499 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 TDGF1P13385 188 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CPT2P23786 658 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 PSMB6P28072 239 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 TSPAN7P41732 249 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SLC6A9P48067 706 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 ATP1B3P54709 279 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 RAC3P60763 192 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 RAB35Q15286 201 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 SLC22A6Q4U2R8 563 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 PHYHD1Q5SRE7 291 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 FAM27BQ5VT28 67 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 DRAM2Q6UX65 266 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 Q7L0L9 218 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SLC16A14Q7RTX9 510 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CCDC36Q8IYA8 594 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 ADAD2Q8NCV1 583 aaKnown RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 BVESQ8NE79 360 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 OR52H1Q8NGJ2 320 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 HAS2Q92819 552 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 ZNF799Q96GE5 643 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms