RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 OR2B6P58173 313 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 VSX2P58304 361 aaPredicted RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RPL23P62829 140 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 IL5RAQ01344 420 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ERCC8Q13216 396 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PMS2P3Q13401 168 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CPTPQ5TA50 214 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RWDD4Q6NW29 188 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 AHSA2Q719I0 299 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ABHD13Q7L211 337 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 COPS6Q7L5N1 327 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 SETD3Q86TU7 594 aaPredicted RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 NELFCDQ8IXH7 590 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 IQCF2Q8IXL9 164 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RIMKLAQ8IXN7 391 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PRSS58Q8IYP2 241 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 BOD1L2Q8IYS8 172 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ST13P4Q8IZP2 240 aaPredicted RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 FAM9CQ8IZT9 166 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CDRT4Q8N9R6 151 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 OR13G1Q8NGZ3 307 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CLHC1Q8NHS4 586 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PIFOQ8TCI5 191 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM234Q8WY98 164 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF488Q96MN9 340 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 Q96MT0 163 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CATSPER2Q96P56 530 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TIMM17AQ99595 171 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RHOXF2Q9BQY4 288 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 LLPHQ9BRT6 129 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 COPS4Q9BT78 406 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM243Q9BU79 118 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CHAC1Q9BUX1 264 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ULBP2Q9BZM5 246 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PLEKHA1Q9HB21 404 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 CSNK1G1Q9HCP0 422 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ZNHIT6Q9NWK9 470 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 NUFIP1Q9UHK0 495 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF222Q9UK12 451 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 SCML1Q9UN30 329 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM131Q92545 1883 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 JCADQ9P266 1359 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 MN1Q10571 1320 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 IGHV3-74A0A0B4J1X5 117 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 hCG_2039718K7EN88 272 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CDC40O60508 579 aaKnown RBP eCLIP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CTNSO60931 367 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 GLSO94925 669 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 RCBTB2O95199 551 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 VAPBO95292 243 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 TNFAIP8O95379 198 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 IGKV1D-16P01601 117 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 HLA-DPB1P04440 258 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 RPN2P04844 631 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ZDHHC11BP0C7U3 371 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 PNMA6AP0CW24 399 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SMIM10L1P0DMW3 83 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 IGFBP3P17936 291 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 RAB3AP20336 220 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 PAX6P26367 422 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 POLR2IP36954 125 aaKnown RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 TALDO1P37837 337 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 MAGEA6P43360 314 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 MLF1P58340 268 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SKP1P63208 163 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CDK5Q00535 292 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 STX4Q12846 297 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 QPRTQ15274 297 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 OR1Q1Q15612 314 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ORMDL2Q53FV1 153 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SMUG1Q53HV7 270 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ACTL10Q5JWF8 245 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 FAM27D1Q5T7N8 215 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 Q5W150 140 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF470Q6ECI4 717 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 FAHD1Q6P587 224 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ERICH5Q6P6B1 374 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 OR2AE1Q8NHA4 323 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 DDI1Q8WTU0 396 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CCDC12Q8WUD4 166 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 OR5P2Q8WZ92 322 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 CDS1Q92903 461 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 NTAN1Q96AB6 310 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 MRGPRFQ96AM1 343 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 RCN3Q96D15 328 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SMIM10Q96HG1 83 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ALS2CR12Q96Q35 445 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SPACA5Q96QH8 159 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ACBD6Q9BR61 282 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 NDEL1Q9GZM8 345 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SAV1Q9H4B6 383 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF442Q9H7R0 627 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 NOX3Q9HBY0 568 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 VCX3AQ9NNX9 186 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 RMND1Q9NWS8 449 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 SDHAF2Q9NX18 166 aa1.72□□□□□ -2.13
PTPN4-205ENST00000433888 NDRG2Q9UN36 371 aaKnown RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 FARSAQ9Y285 508 aaKnown RBP1.72□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF257Q9Y2Q1 563 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms