RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RIN1Q13671 783 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 OR8B8Q15620 311 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 WDR38Q5JTN6 314 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 PRAMEF6Q5VXH4 476 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 AHSA2Q719I0 299 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 CATSPERDQ86XM0 798 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 KLBQ86Z14 1044 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
TREX1-201ENST00000433541 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 MICU1Q9BPX6 476 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 SOX7Q9BT81 388 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 G6PC2Q9NQR9 355 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 TMEM106BQ9NUM4 274 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 YLPM1P49750 1951 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 ZNF816-ZNF321PA0A0X1KG74 233 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 SYT7O43581 403 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 RP2O75695 350 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 DHRS3O75911 302 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 ATP6V1B1P15313 513 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 FAHP16930 419 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ACKR3P25106 362 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ST3GAL4Q11206 333 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ZNF684Q5T5D7 378 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 DOK3Q7L591 496 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 BIVMQ86UB2 503 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ZDHHC23Q8IYP9 409 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 SYS1Q8N2H4 156 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 KLHL36Q8N4N3 616 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ZNF676Q8N7Q3 588 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 HPS1Q92902 700 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 SMR3AQ99954 134 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 GAL3ST1Q99999 423 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 RTL8AQ9BWD3 113 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 FN3KRPQ9HA64 309 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 GCM1Q9NP62 436 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ABCB9Q9NP78 766 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 FGF20Q9NP95 211 aaPredicted RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 MRPS18AQ9NVS2 196 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 ENPP5Q9UJA9 477 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 DIMT1Q9UNQ2 313 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 EXOSC1Q9Y3B2 195 aaKnown RBP13.13□□□□□ -0.31
TREX1-201ENST00000433541 MPC1Q9Y5U8 109 aa13.13□□□□□ -0.31
TREX1-201ENST00000433541 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 LRP5LA4QPB2 252 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 VWC2LB2RUY7 222 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 CD200P41217 278 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 ETV1P50549 477 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 LOXL1Q08397 574 aaPredicted RBP13.12□□□□□ -0.31
TREX1-201ENST00000433541 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
TREX1-201ENST00000433541 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 MOB3CQ70IA8 216 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 OR2G2Q8NGZ5 317 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 GGHQ92820 318 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 PELI1Q96FA3 418 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 UBAP1Q9NZ09 502 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 PCDHB10Q9UN67 800 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
TREX1-201ENST00000433541 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 A6NIN4 97 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 MYL12BO14950 172 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 ZNF12P17014 697 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 ZNF20P17024 532 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 CDH15P55291 814 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 CSNK2BP67870 215 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 MRPL28Q13084 256 aaKnown RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 MAB21L1Q13394 359 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 OR2G6Q5TZ20 316 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 TMEM244Q5VVB8 128 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 PRSS35Q8N3Z0 413 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 RNF170Q96K19 258 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 ANKRD60Q9BZ19 345 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 Q9H521 79 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 C1orf123Q9NWV4 160 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
TREX1-201ENST00000433541 NPTNQ9Y639 398 aa13.11□□□□□ -0.31
TREX1-201ENST00000433541 TEP1Q99973 2627 aaKnown RBP13.1□□□□□ -0.31
TREX1-201ENST00000433541 SLC1A7O00341 560 aa13.1□□□□□ -0.31
TREX1-201ENST00000433541 ZNF205O95201 554 aa13.1□□□□□ -0.31
TREX1-201ENST00000433541 CST4P01036 141 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms