RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ACBD4Q8NC06 268 aa22.7■■□□□ 1.22
TMEM248-205ENST00000433271 CLEC18CQ8NCF0 446 aa22.7■■□□□ 1.22
TMEM248-205ENST00000433271 CA10Q9NS85 328 aa22.7■■□□□ 1.22
TMEM248-205ENST00000433271 RHBDD3Q9Y3P4 386 aa22.7■■□□□ 1.22
TMEM248-205ENST00000433271 PLCE1Q9P212 2302 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 SHISA9B4DS77 424 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 PPP3R1P63098 170 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 MXD1Q05195 221 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 CLVS2Q5SYC1 327 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 PIGTQ969N2 578 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 POU2F3Q9UKI9 436 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 RNF115Q9Y4L5 304 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 ATP23Q9Y6H3 246 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 LRRK2Q5S007 2527 aa22.69■■□□□ 1.22
TMEM248-205ENST00000433271 IQCF6A8MYZ5 107 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 ALX3O95076 343 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 CST4P01036 141 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 RAB3AP20336 220 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 KITLGP21583 273 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 CNPY1Q3B7I2 92 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 VHLLQ6RSH7 139 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 LRRTM1Q86UE6 522 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 OR1M1Q8NGA1 313 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 SYNPRQ8TBG9 265 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 TPK1Q9H3S4 243 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 ZNF442Q9H7R0 627 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 FZR1Q9UM11 496 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 PDCD5O14737 125 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 SULT1B1O43704 296 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 GMDSO60547 372 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 MAS1P04201 325 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 CLEC2LP0C7M8 214 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 LOXP28300 417 aaPredicted RBP22.68■■□□□ 1.22
TMEM248-205ENST00000433271 SPTAN1Q13813 2472 aaKnown RBP22.68■■□□□ 1.22
TMEM248-205ENST00000433271 MSMPQ1L6U9 139 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 BHLHE23Q8NDY6 225 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 OR13C9Q8NGT0 318 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 DYNC2LI1Q8TCX1 351 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 MRPL15Q9P015 296 aaKnown RBP22.68■■□□□ 1.22
TMEM248-205ENST00000433271 KCNN3Q9UGI6 736 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 PURGQ9UJV8 347 aaKnown RBP22.68■■□□□ 1.22
TMEM248-205ENST00000433271 CMAHPQ9Y471 501 aa22.68■■□□□ 1.22
TMEM248-205ENST00000433271 MEGF11A6BM72 1044 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 ANKRD30BLA7E2S9 258 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 NRASP01111 189 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 ZNF182P17025 639 aaPredicted RBP22.67■■□□□ 1.22
TMEM248-205ENST00000433271 ADRA2CP18825 462 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 RAB3BP20337 219 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 UBE2V2Q15819 145 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 TMEM255AQ5JRV8 349 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 CEP78Q5JTW2 689 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 OR51A2Q8NGJ7 313 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 UBASH3BQ8TF42 649 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 SLC25A46Q96AG3 418 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 PIK3IP1Q96FE7 263 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 SLC30A2Q9BRI3 323 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 TMEM204Q9BSN7 226 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 DCUN1D5Q9BTE7 237 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 PAPOLGQ9BWT3 736 aaKnown RBP22.67■■□□□ 1.22
TMEM248-205ENST00000433271 TMEM138Q9NPI0 162 aa22.67■■□□□ 1.22
TMEM248-205ENST00000433271 ALKBH6Q3KRA9 238 aa22.66■■□□□ 1.22
TMEM248-205ENST00000433271 MEX3BQ6ZN04 569 aaKnown RBP22.66■■□□□ 1.22
TMEM248-205ENST00000433271 PIGCQ92535 297 aa22.66■■□□□ 1.22
TMEM248-205ENST00000433271 DUSP13Q9UII6 198 aa22.66■■□□□ 1.22
TMEM248-205ENST00000433271 AK6Q9Y3D8 172 aaKnown RBP22.66■■□□□ 1.22
TMEM248-205ENST00000433271 IGKV1-9A0A0C4DH69 117 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 LILRA1O75019 489 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 IGHV3-13P01766 116 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 ERCC1P07992 297 aaPredicted RBP22.65■■□□□ 1.22
TMEM248-205ENST00000433271 BDKRB2P30411 391 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 PSMD7P51665 324 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 KLF3P57682 345 aaPredicted RBP22.65■■□□□ 1.22
TMEM248-205ENST00000433271 NR2C2APQ86WQ0 139 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 OR5AS1Q8N127 324 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 MRPL24Q96A35 216 aaKnown RBP22.65■■□□□ 1.22
TMEM248-205ENST00000433271 TECTBQ96PL2 329 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 HS3ST6Q96QI5 342 aa22.65■■□□□ 1.22
TMEM248-205ENST00000433271 IGLV3-9A0A075B6K5 115 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 VSTM5A8MXK1 200 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 PRSS44E7EML9 344 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 TIMM8AO60220 97 aaPredicted RBP22.64■■□□□ 1.22
TMEM248-205ENST00000433271 ATF1P18846 271 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 RORCP51449 518 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 SELENOVP59797 346 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 DAZAP2Q15038 168 aaPredicted RBP22.64■■□□□ 1.22
TMEM248-205ENST00000433271 GPR173Q9NS66 373 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 MPC1Q9Y5U8 109 aa22.64■■□□□ 1.22
TMEM248-205ENST00000433271 SMIM30A4D0T7 59 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 ANXA2P2A6NMY6 339 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 ZNF850A8MQ14 1090 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 OR10A3P58181 314 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 LRP11Q86VZ4 500 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 NKAIN3Q8N8D7 197 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 OR8G5Q8NG78 346 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 GFI1Q99684 422 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 SPOCK3Q9BQ16 436 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 PPP1R3EQ9H7J1 279 aa22.64■■□□□ 1.21
TMEM248-205ENST00000433271 ROS1P08922 2347 aa22.63■■□□□ 1.21
TMEM248-205ENST00000433271 E7EQL1 145 aa22.63■■□□□ 1.21
TMEM248-205ENST00000433271 NCR1O76036 304 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms