RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CDRT15L2A8MXV6 281 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 JUNBP17275 347 aaPredicted RBP14.96□□□□□ -0.01
RIF1-204ENST00000430328 TNFRSF4P43489 277 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 METAP1P53582 386 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 TMEM128Q5BJH2 165 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 LRRC15Q8TF66 581 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 TEAD3Q99594 435 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 TMEM127O75204 238 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 HIST1H1BP16401 226 aaKnown RBP14.96□□□□□ -0.01
RIF1-204ENST00000430328 NMUP48645 174 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 NXPE3Q969Y0 559 aa14.96□□□□□ -0.01
RIF1-204ENST00000430328 TMEM267Q0VDI3 215 aaPredicted RBP14.96□□□□□ -0.02
RIF1-204ENST00000430328 IL10RAQ13651 578 aa14.96□□□□□ -0.02
RIF1-204ENST00000430328 ZPBPQ9BS86 351 aa14.96□□□□□ -0.02
RIF1-204ENST00000430328 RSRP1Q9BUV0 290 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 OR6C3Q9NZP0 311 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 AHCTF1Q8WYP5 2266 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 RPL27P61353 136 aaKnown RBP14.95□□□□□ -0.02
RIF1-204ENST00000430328 TIAL1Q01085 375 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■□□□ 13.3
RIF1-204ENST00000430328 ZNF385DQ9H6B1 395 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 MANBALQ9NQG1 85 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 MIOXQ9UGB7 285 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 TRGV10A0A0A0MS01 117 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 CDKN3Q16667 212 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 NEURL3Q96EH8 262 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 C5orf49A4QMS7 147 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 SMIM21Q3B7S5 101 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 ZNF519Q8TB69 540 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 SIGLEC6O43699 453 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 PGA3P0DJD8 388 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 LIPAP38571 399 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 ZC3H12DA2A288 527 aaKnown RBP14.95□□□□□ -0.02
RIF1-204ENST00000430328 TMEM25Q86YD3 366 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 VN1R17PQ8TDU5 208 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 DTD2Q96FN9 168 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 CTRCQ99895 268 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 WRAP73Q9P2S5 460 aaPredicted RBP14.95□□□□□ -0.02
RIF1-204ENST00000430328 H0YGG7 62 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 CD70P32970 193 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 VMA21Q3ZAQ7 101 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 MEGF10Q96KG7 1140 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 SNX22Q96L94 193 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 THYN1Q9P016 225 aa14.95□□□□□ -0.02
RIF1-204ENST00000430328 TMPRSS11DO60235 418 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 CST4P01036 141 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 PPP1CAP62136 330 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 OR52N4Q8NGI2 321 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 PCYT2Q99447 389 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 NAT8Q9UHE5 227 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 ISLRO14498 428 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 ZNF324O75467 553 aaPredicted RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 DNAL4O96015 105 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 CAMKMTQ7Z624 323 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 NPWQ8N729 165 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 PARD6GQ9BYG4 376 aaPredicted RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 ACP1P24666 158 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 C19orf57Q0VDD7 668 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 C1orf140Q5VVS0 124 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 LIPNQ5VXI9 398 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 NTNG2Q96CW9 530 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 OR6C1Q96RD1 312 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 MMP15P51511 669 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 CLDN2P57739 230 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 ZDHHC23Q8IYP9 409 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 SLC25A43Q8WUT9 341 aaPredicted RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 PIPOXQ9P0Z9 390 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 WNT3P56703 355 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 PRDX1Q06830 199 aaKnown RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 CLN3Q13286 438 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 AGBL5Q8NDL9 886 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 SLAMF8Q9P0V8 285 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 SLC5A6Q9Y289 635 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 DUOX1Q9NRD9 1551 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 MFSD2BA6NFX1 497 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
RIF1-204ENST00000430328 PDPNQ86YL7 162 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 DEFB108BQ8NET1 73 aa14.94□□□□□ -0.02
RIF1-204ENST00000430328 HCRTR1O43613 425 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 CDC20Q12834 499 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 HES3Q5TGS1 186 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 BCDIN3DQ7Z5W3 292 aaKnown RBP14.93□□□□□ -0.02
RIF1-204ENST00000430328 OR51E1Q8TCB6 317 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 TIMM10BQ9Y5J6 103 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 CYB561P49447 251 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 PFN4Q8NHR9 129 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 SH2D2AQ9NP31 389 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 FGF2P09038 288 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 APOBEC1P41238 236 aaKnown RBP14.93□□□□□ -0.02
RIF1-204ENST00000430328 ZADH2Q8N4Q0 377 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 CLDN23Q96B33 292 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 NIPSNAP1Q9BPW8 284 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 A0A1W2PN81 502 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 SOX15O60248 233 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 CD3DP04234 171 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 POLR2IP36954 125 aaKnown RBP14.93□□□□□ -0.02
RIF1-204ENST00000430328 PCP4P48539 62 aa14.93□□□□□ -0.02
RIF1-204ENST00000430328 SAXO2Q658L1 398 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms