RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GZMMP51124 257 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TAS2R31P59538 309 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SPATA46Q5T0L3 261 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 PLPP7Q8NBV4 271 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 HPSE2Q8WWQ2 592 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 MSTNO14793 375 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 CYB5BO43169 146 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 YIF1AO95070 293 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TDGF1P13385 188 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SELENOPP49908 381 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SYS1Q8N2H4 156 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ABHD6Q9BV23 337 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SLCO1C1Q9NYB5 712 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 CLEC2DQ9UHP7 191 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ING1Q9UK53 422 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 MTCL1Q9Y4B5 1905 aaKnown RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SLC31A2O15432 143 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 PHF1O43189 567 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TP53P04637 393 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF93P35789 620 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 GSK3AP49840 483 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 C12orf73Q69YU5 71 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 NANOGP1Q8N7R0 232 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 EMG1Q92979 244 aaKnown RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 WNT2BQ93097 391 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 NKX3-1Q99801 234 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 GPR84Q9NQS5 396 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM129A0AVI4 362 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 GLI4P10075 376 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 PAX6P26367 422 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 MPGP29372 298 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 CDK5Q00535 292 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TBR1Q16650 682 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF441Q8N8Z8 693 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 OR10K1Q8NGX5 313 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 BANF2Q9H503 90 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 HLA-HP01893 362 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 ETV1P50549 477 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 METAP1DQ6UB28 335 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-207ENST00000429896 FAM71CQ8NEG0 241 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 PPA2Q9H2U2 334 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 A3GALT2U3KPV4 340 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 KLF7O75840 302 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF32P17041 273 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 SNCAP37840 140 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 FUT5Q11128 374 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 KCNJ8Q15842 424 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 SSX8Q7RTT4 187 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 OTOSQ8NHW6 89 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 ZFAND1Q8TCF1 268 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 RPL3LQ92901 407 aaKnown RBP11.46□□□□□ -0.57
PTCH1-207ENST00000429896 PRRT1Q99946 306 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 PPP1R3CQ9UQK1 317 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 RDH10Q8IZV5 341 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 C20orf24Q9BUV8 137 aa11.46□□□□□ -0.57
PTCH1-207ENST00000429896 COX6B1P14854 86 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 RBP2P50120 134 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 ELLP55199 621 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF546Q86UE3 836 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 NFAM1Q8NET5 270 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-207ENST00000429896 KCNG3Q8TAE7 436 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 PHYHIPQ92561 330 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 RAB3CQ96E17 227 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 GPR35Q9HC97 309 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 ANKRD12Q6UB98 2062 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 SERTM2A0A1B0GWG4 89 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 SHC1P29353 583 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 MAGEB1P43366 347 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 TNFSF10P50591 281 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF774Q6NX45 483 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 ZDHHC23Q8IYP9 409 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 OR5M11Q96RB7 305 aa11.46□□□□□ -0.58
PTCH1-207ENST00000429896 BHLHE40O14503 412 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CDC42EP2O14613 210 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 NRASP01111 189 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 IL1AP01583 271 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CYCSP99999 105 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 SMAP2Q8WU79 429 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 TRMT61AQ96FX7 289 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 RANGRFQ9HD47 186 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CHCHD2Q9Y6H1 151 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 P2RX3P56373 397 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 HACD4Q5VWC8 232 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 LHFPL2Q6ZUX7 228 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 BMPERQ8N8U9 685 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms