RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CST1P01037 141 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 LHBP01229 141 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 IGHV1-69P01742 117 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 APOC1P02654 83 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 H2BFMP0C1H6 154 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 RAP2AP10114 183 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 PAICSP22234 425 aaKnown RBP14.12□□□□□ -0.15
TRIM39-209ENST00000428728 POU1F1P28069 291 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 OPRL1P41146 370 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 RAG2P55895 527 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 GMFBP60983 142 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 MICBQ29980 383 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 WDR38Q5JTN6 314 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 WDR82Q6UXN9 313 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 SHFQ7M4L6 423 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 PRSS45Q7RTY3 260 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 C11orf53Q8IXP5 236 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 TIGD4Q8IY51 512 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 FAM216BQ8N7L0 139 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 SCCPDHQ8NBX0 429 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 OR1M1Q8NGA1 313 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 OR52H1Q8NGJ2 320 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 CCL13Q99616 98 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 OR10A2Q9H208 303 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 RNPEPL1Q9HAU8 725 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 ACOXLQ9NUZ1 547 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 TAS2R1Q9NYW7 299 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 ZNF319Q9P2F9 582 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 PRPF19Q9UMS4 504 aaKnown RBP14.12□□□□□ -0.15
TRIM39-209ENST00000428728 RHBDD3Q9Y3P4 386 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 KCNAB3O43448 404 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 KNG1P01042 644 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 CALB2P22676 271 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 CFL1P23528 166 aaKnown RBP14.11□□□□□ -0.15
TRIM39-209ENST00000428728 PDCD1Q15116 288 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 PLBD1Q6P4A8 553 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 TREML4Q6UXN2 200 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 CD300LDQ6UXZ3 194 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 KIR3DL3Q8N743 410 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 ASB9Q96DX5 294 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 FAM71F1Q96KD3 344 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-209ENST00000428728 CCT8L2Q96SF2 557 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 SLITRK2Q9H156 845 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 ONECUT1Q9UBC0 465 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 KAAG1Q9UBP8 84 aa14.11□□□□□ -0.15
TRIM39-209ENST00000428728 RPUSD1Q9UJJ7 312 aaKnown RBP14.11□□□□□ -0.15
TRIM39-209ENST00000428728 ANXA2P2A6NMY6 339 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 PRR23D1E9PI22 279 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 GNGT2O14610 69 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 ACOT8O14734 319 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 TIPRLO75663 272 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 ECDO95905 644 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 LYNP07948 512 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 PRR23D2P0DMB1 279 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 NAA10P41227 235 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 SRSF4Q08170 494 aaKnown RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 SLC36A1Q7Z2H8 476 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 VMO1Q7Z5L0 202 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 TMEM179BQ7Z7N9 219 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 ADGRG5Q8IZF4 528 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 CSNK2A3Q8NEV1 391 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 OR4F5Q8NH21 305 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 THEM6Q8WUY1 208 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 SSMEM1Q8WWF3 244 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 WFDC12Q8WWY7 111 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 ITPKCQ96DU7 683 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 MICU1Q9BPX6 476 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 CHID1Q9BWS9 393 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 C1RLQ9NZP8 487 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 PDP1Q9P0J1 537 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-209ENST00000428728 MMP24Q9Y5R2 645 aa14.1□□□□□ -0.15
TRIM39-209ENST00000428728 A0A0U1RQK1 487 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 ARRDC5A6NEK1 342 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 CDIPTO14735 213 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 SELLP14151 372 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 MUC1P15941 1255 aaPredicted RBP14.09□□□□□ -0.15
TRIM39-209ENST00000428728 ACKR3P25106 362 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 RELBQ01201 579 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 PRB3Q04118 309 aaPredicted RBP14.09□□□□□ -0.15
TRIM39-209ENST00000428728 PRDX4Q13162 271 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 IKZF1Q13422 519 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 GK3PQ14409 553 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 GINS1Q14691 196 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 C17orf107Q6ZR85 190 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 KCTD8Q6ZWB6 473 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 FTMTQ8N4E7 242 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 TMEM86BQ8N661 226 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 CCDC197Q8NCU1 140 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 OR5T2Q8NGG2 359 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 OTOSQ8NHW6 89 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 RTL8AQ9BWD3 113 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 BEX1Q9HBH7 125 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 SNTG1Q9NSN8 517 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 DNAJB11Q9UBS4 358 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 KLHDC2Q9Y2U9 406 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 POMT1Q9Y6A1 747 aa14.09□□□□□ -0.15
TRIM39-209ENST00000428728 ZNF850A8MQ14 1090 aa14.08□□□□□ -0.16
TRIM39-209ENST00000428728 E2F6O75461 281 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms