RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 FEVQ99581 238 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 REEP1Q9H902 201 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 C14orf119Q9NWQ9 140 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 PDP1Q9P0J1 537 aaPredicted RBP12.8□□□□□ -0.36
SEC13-210ENST00000428626 RPUSD1Q9UJJ7 312 aaKnown RBP12.8□□□□□ -0.36
SEC13-210ENST00000428626 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
SEC13-210ENST00000428626 RIIAD1A6NNX1 92 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 ANKRD30BLA7E2S9 258 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 ACOT8O14734 319 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 IGHV4-59P01825 116 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 ACKR3P25106 362 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 GSTT1P30711 240 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 SLC15A1P46059 708 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 RAG2P55895 527 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 GFOD2Q3B7J2 385 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
SEC13-210ENST00000428626 LY6G5BQ8NDX9 201 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 GATAD2BQ8WXI9 593 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 CLPTM1LQ96KA5 538 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 WDR13Q9H1Z4 485 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 SEMA6AQ9H2E6 1030 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 BRD7Q9NPI1 651 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 TRIM36Q9NQ86 728 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 ACOXLQ9NUZ1 547 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
SEC13-210ENST00000428626 CDIPTO14735 213 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 SELENOFO60613 162 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 GLCEO94923 617 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 NDUFA7O95182 113 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 IFNGP01579 166 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 ZNF3P17036 446 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 HSD11B1P28845 292 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 GRK5P34947 590 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 TMEM86BQ8N661 226 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 FAM71F1Q96KD3 344 aaPredicted RBP12.78□□□□□ -0.36
SEC13-210ENST00000428626 LYZL4Q96KX0 146 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 OR51V1Q9H2C8 321 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 TOR3AQ9H497 397 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 CNTD2Q9H8S5 307 aa12.78□□□□□ -0.36
SEC13-210ENST00000428626 KNG1P01042 644 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
SEC13-210ENST00000428626 BLVRAP53004 296 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 GMFBP60983 142 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 MZT1Q08AG7 82 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 PDCD1Q15116 288 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 MICBQ29980 383 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 FAM98BQ52LJ0 330 aaKnown RBP12.77□□□□□ -0.37
SEC13-210ENST00000428626 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 STUMQ69YW2 141 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 RHOUQ7L0Q8 258 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 VMO1Q7Z5L0 202 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 Q8N7P7 452 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 TEX47Q8TBZ9 253 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 GIPC3Q8TF64 312 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 HPSE2Q8WWQ2 592 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 OTULINQ96BN8 352 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 CCDC124Q96CT7 223 aaKnown RBP12.77□□□□□ -0.37
SEC13-210ENST00000428626 CITED1Q99966 193 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 PAPOLGQ9BWT3 736 aaKnown RBP12.77□□□□□ -0.37
SEC13-210ENST00000428626 MUC13Q9H3R2 512 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 BEX1Q9HBH7 125 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 POMT1Q9Y6A1 747 aa12.77□□□□□ -0.37
SEC13-210ENST00000428626 PRKDCP78527 4128 aaKnown RBP12.77□□□□□ -0.37
SEC13-210ENST00000428626 ZNF850A8MQ14 1090 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 H3BN98 237 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 GPR137BO60478 399 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 ECDO95905 644 aaPredicted RBP12.76□□□□□ -0.37
SEC13-210ENST00000428626 RAP2AP10114 183 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 IER3P46695 156 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 TGM4P49221 684 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 MNAT1P51948 309 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 DEFA6Q01524 100 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 IKZF1Q13422 519 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 GINS1Q14691 196 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 PLBD1Q6P4A8 553 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 ARHGAP24Q8N264 748 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 GALNT4Q8N4A0 578 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 BBS1Q8NFJ9 593 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 OR52H1Q8NGJ2 320 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 OR4F5Q8NH21 305 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 OTOSQ8NHW6 89 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 SSMEM1Q8WWF3 244 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 RPL3LQ92901 407 aaKnown RBP12.76□□□□□ -0.37
SEC13-210ENST00000428626 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 CCT8L2Q96SF2 557 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
SEC13-210ENST00000428626 OR10A2Q9H208 303 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms