RNA–Protein interactions for RNA: ENST00000428064.5

LIMS1-208, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 2

Gene LIMS1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-208ENST00000428064 IGHV1-69DA0A0B4J2H0 117 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 FAM183AA6NL82 134 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 GPR37O15354 613 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 IGHV1-69P01742 117 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 GSK3AP49840 483 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 FAM57BQ71RH2 274 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 LRRC29Q8WV35 223 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 SSMEM1Q8WWF3 244 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 FEVQ99581 238 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 CHIAQ9BZP6 476 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 RASSF4Q9H2L5 321 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 MED20Q9H944 212 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 BEX1Q9HBH7 125 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 ABCB9Q9NP78 766 aa17.34■□□□□ 0.37
LIMS1-208ENST00000428064 H3BN98 237 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 HOXB6P17509 224 aaKnown RBP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 PAICSP22234 425 aaKnown RBP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 NAA10P41227 235 aaPredicted RBP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 IL5RAQ01344 420 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 OCLNQ16625 522 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 CDONQ4KMG0 1287 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 FIP1L1Q6UN15 594 aaKnown RBP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 TREML4Q6UXN2 200 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 SLC36A1Q7Z2H8 476 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 LDLRAD3Q86YD5 345 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 GALNT4Q8N4A0 578 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 LY6G5BQ8NDX9 201 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 OTOSQ8NHW6 89 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 GIPC3Q8TF64 312 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 WFDC12Q8WWY7 111 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 TAF15Q92804 592 aaKnown RBP eCLIP17.33■□□□□ 0.36
LIMS1-208ENST00000428064 ITPKCQ96DU7 683 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 AMELYQ99218 206 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 C1orf21Q9H246 121 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 CNTD2Q9H8S5 307 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 ZNF319Q9P2F9 582 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 ZNF391Q9UJN7 358 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 MPC1Q9Y5U8 109 aa17.33■□□□□ 0.36
LIMS1-208ENST00000428064 IGHV3OR15-7A0A075B7D8 119 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 A0A1B0GVI7 797 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 ANXA2P2A6NMY6 339 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 PRODHO43272 600 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 CST1P01037 141 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 CRYBA1P05813 215 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 LYNP07948 512 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 H2BFMP0C1H6 154 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 GNALP38405 381 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 RAG2P55895 527 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 CSNK2BP67870 215 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 WDR38Q5JTN6 314 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 ATPAF1Q5TC12 328 aaPredicted RBP17.32■□□□□ 0.36
LIMS1-208ENST00000428064 METAP1DQ6UB28 335 aaPredicted RBP17.32■□□□□ 0.36
LIMS1-208ENST00000428064 IQCF1Q8N6M8 205 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 ZNF454Q8N9F8 522 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 OR10Z1Q8NGY1 313 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 TBC1D15Q8TC07 691 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 ST8SIA4Q92187 359 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 DYRK2Q92630 601 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 LHX4Q969G2 390 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 MICU1Q9BPX6 476 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 PAPOLGQ9BWT3 736 aaKnown RBP17.32■□□□□ 0.36
LIMS1-208ENST00000428064 DNTTIP1Q9H147 329 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 C1RLQ9NZP8 487 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 DNAJC27Q9NZQ0 273 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 RHBDD3Q9Y3P4 386 aa17.32■□□□□ 0.36
LIMS1-208ENST00000428064 TMEM210A6NLX4 147 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 KNG1P01042 644 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 OMGP23515 440 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 ARF6P62330 175 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 RELBQ01201 579 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 KIR3DL3Q8N743 410 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 PGAM5Q96HS1 289 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 LRGUKQ96M69 825 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 CCT8L2Q96SF2 557 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 RTL8AQ9BWD3 113 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 CHID1Q9BWS9 393 aa17.31■□□□□ 0.36
LIMS1-208ENST00000428064 PRR23D1E9PI22 279 aaPredicted RBP17.3■□□□□ 0.36
LIMS1-208ENST00000428064 ACOT8O14734 319 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 CST4P01036 141 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 PRR23D2P0DMB1 279 aaPredicted RBP17.3■□□□□ 0.36
LIMS1-208ENST00000428064 T-ENOLP0DO92 83 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 FAM76BQ5HYJ3 339 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 OLFML2AQ68BL7 652 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 STUMQ69YW2 141 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 KRT74Q7RTS7 529 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.3■□□□□ 0.36
LIMS1-208ENST00000428064 ADGRG5Q8IZF4 528 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 NPRL2Q8WTW4 380 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 ITFG2Q969R8 447 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 CCL13Q99616 98 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 OR51V1Q9H2C8 321 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 NIPAL2Q9H841 368 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 CMYA5Q8N3K9 4069 aa17.3■□□□□ 0.36
LIMS1-208ENST00000428064 A0A1B0GW55 424 aa17.29■□□□□ 0.36
LIMS1-208ENST00000428064 AQP12BA6NM10 295 aa17.29■□□□□ 0.36
LIMS1-208ENST00000428064 CDIPTO14735 213 aa17.29■□□□□ 0.36
LIMS1-208ENST00000428064 FAM107AO95990 144 aa17.29■□□□□ 0.36
LIMS1-208ENST00000428064 DUX4L2P0CJ85 424 aa17.29■□□□□ 0.36
LIMS1-208ENST00000428064 DUX4L3P0CJ86 424 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms