RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 HGFACQ04756 655 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 MEF2DQ14814 521 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 NKPD1Q17RQ9 610 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SLC22A6Q4U2R8 563 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 PLXDC2Q6UX71 529 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SLC16A14Q7RTX9 510 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 GALNTL5Q7Z4T8 443 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SUMF1Q8NBK3 374 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 OR2AE1Q8NHA4 323 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 GPR137Q96N19 417 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SLC6A7Q99884 636 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 ZNF224Q9NZL3 707 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 TIMM10BQ9Y5J6 103 aa12.24□□□□□ -0.45
APOBEC3D-202ENST00000427494 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 G3V3Q6 166 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SOCS1O15524 211 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TOXO94900 526 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 IGHV3-9P01782 118 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 LCATP04180 440 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SP1P08047 785 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 FCGR2AP12318 317 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PTGFRP43088 359 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 GNG2P59768 71 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PCBD1P61457 104 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PSG4Q00888 419 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 RNASE10Q5GAN6 216 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 OR52W1Q6IF63 320 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 CRIP3Q6Q6R5 217 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PIP4P1Q86T03 277 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 CCDC107Q8WV48 283 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PIGTQ969N2 578 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 C10orf35Q96D05 121 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 REEP6Q96HR9 211 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 OR2H1Q9GZK4 316 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 WNT5BQ9H1J7 359 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PIPOXQ9P0Z9 390 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 EIF3KQ9UBQ5 218 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 KLF13Q9Y2Y9 288 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SSX5O60225 188 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 NME2P1O60361 137 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 ZNF708P17019 499 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 NME2P22392 152 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 UBE2MP61081 183 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TSPO2Q5TGU0 170 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SKA3Q8IX90 412 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 MDS2Q8NDY4 140 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 OR56B1Q8NGI3 324 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TNFAIP8L1Q8WVP5 186 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 URM1Q9BTM9 101 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 CST11Q9H112 138 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 TMEM165Q9HC07 324 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 GPR173Q9NS66 373 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 SLC23A1Q9UHI7 598 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
APOBEC3D-202ENST00000427494 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 ARGFXA6NJG6 315 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 ALX3O95076 343 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 S100A1P23297 94 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 FAM189A2Q15884 450 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 KRTAP27-1Q3LI81 207 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 C1QL2Q7Z5L3 287 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 DEFB124Q8NES8 71 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 HAS2Q92819 552 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 PARD6AQ9NPB6 346 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 GHRLQ9UBU3 117 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 MCTS1Q9ULC4 181 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 MED13Q9UHV7 2174 aa12.22□□□□□ -0.45
APOBEC3D-202ENST00000427494 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 GOSR2O14653 212 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 FARS2O95363 451 aaKnown RBP12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 ACKR3P25106 362 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 HRH1P35367 487 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 RAP2BP61225 183 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 TSPAN5P62079 268 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 CXADRP78310 365 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 TGIF1Q15583 401 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 LGALSLQ3ZCW2 172 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 GLRX5Q86SX6 157 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.45
APOBEC3D-202ENST00000427494 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms