RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TP53I11O14683 189 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 NKX2-2O95096 273 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 TNFSF15O95150 251 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PGCP20142 388 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 MAKP20794 623 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 SOHLH1Q5JUK2 328 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 APOBEC4Q8WW27 367 aaKnown RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 ZNF160Q9HCG1 818 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 C20orf141Q9NUB4 165 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PRR13Q9NZ81 148 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 ACAD8Q9UKU7 415 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 ATG2AQ2TAZ0 1938 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 SPAARA0A1B0GVQ0 90 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 DCDC2BA2VCK2 349 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 HOXB5P09067 269 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 AGAP20933 346 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 DPP4P27487 766 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 MAP3K8P41279 467 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 ZNF345Q14585 488 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 IL11RAQ14626 422 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 ARHGAP11AQ6P4F7 1023 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 DND1Q8IYX4 353 aaKnown RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 SUMF2Q8NBJ7 301 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 OR1J1Q8NGS3 322 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 TNFRSF13CQ96RJ3 184 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 RXFP3Q9NSD7 469 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 IER3IP1Q9Y5U9 82 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 ZNF354AO60765 605 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 OR8U9P0C7N5 309 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 LPAR6P43657 344 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 ZNF41P51814 821 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 DCAF7P61962 342 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 TRIP6Q15654 476 aaKnown RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 LY6G6FQ5SQ64 297 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 C17orf82Q86X59 251 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 OR8U1Q8NH10 309 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 PTPMT1Q8WUK0 201 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 SLC25A21Q9BQT8 299 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 XKRYO14609 159 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 AHSA1O95433 338 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 MT-CO3P00414 261 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 TAGLN2P37802 199 aaKnown RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 EFNB2P52799 333 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 NUBP1P53384 320 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 DVL1P1P54792 670 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 GFI1BQ5VTD9 330 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 LPCAT3Q6P1A2 487 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 ULK3Q6PHR2 472 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 C6orf15Q6UXA7 325 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 DMBX1Q8NFW5 382 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 RSPO3Q9BXY4 272 aaPredicted RBP14.25□□□□□ -0.13
PKP4-205ENST00000426248 CNTNAP3Q9BZ76 1288 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 KIAA1549LQ6ZVL6 1849 aa14.25□□□□□ -0.13
PKP4-205ENST00000426248 A0A1B0GTH9 108 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 GAAP10253 952 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 PI3P19957 117 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 FUT5Q11128 374 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 MEF2DQ14814 521 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 RAB11BQ15907 218 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 ATPAF1Q5TC12 328 aaPredicted RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 PRAMEF8Q5VWM4 474 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 PRAMEF7Q5VXH5 474 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 RPL7L1Q6DKI1 246 aaKnown RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 PLPP7Q8NBV4 271 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 TGFBR3LH3BV60 316 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 ZFPL1O95159 310 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 MMP7P09237 267 aaPredicted RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 PNLIPP16233 465 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 RASGEF1BQ0VAM2 473 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 HES3Q5TGS1 186 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 ZNF813Q6ZN06 617 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 NXT1Q9UKK6 140 aaKnown RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 CADP27708 2225 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 ZNF727A8MUV8 499 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 XRCC3O43542 346 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 OR2J2O76002 312 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 SLC6A6P31641 620 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 UBE2KP61086 200 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 EFNB1P98172 346 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 MIDNQ504T8 468 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 HIST2H3PS2Q5TEC6 136 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 TMEM244Q5VVB8 128 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 ZNF705AQ6ZN79 300 aaPredicted RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 OR1N1Q8NGS0 311 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 PACRGQ96M98 296 aaPredicted RBP14.24□□□□□ -0.13
PKP4-205ENST00000426248 WWTR1Q9GZV5 400 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 PTGES2Q9H7Z7 377 aa14.24□□□□□ -0.13
PKP4-205ENST00000426248 SEC14L6B5MCN3 397 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 ERCC1P07992 297 aaPredicted RBP14.23□□□□□ -0.13
PKP4-205ENST00000426248 HCKP08631 526 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 RPS27P42677 84 aaKnown RBP14.23□□□□□ -0.13
PKP4-205ENST00000426248 HMGN3Q15651 99 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 VSTM2LQ96N03 204 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 OPN3Q9H1Y3 402 aaPredicted RBP14.23□□□□□ -0.13
PKP4-205ENST00000426248 CMC2Q9NRP2 79 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 GOLT1BQ9Y3E0 138 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 MUC22E2RYF6 1773 aaPredicted RBP14.23□□□□□ -0.13
PKP4-205ENST00000426248 A0A1B0GWJ7 208 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms