RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 DOCK7Q96N67 2140 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 LRRC3CA6NJW4 275 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 DISC1C4P0D8 188 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 MCRIP1C9JLW8 97 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 CELA3AP09093 270 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 CYB561P49447 251 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 ZNF84P51523 738 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 B3GALT5-AS1P59052 145 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 KISS1Q15726 138 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 UBE2V2Q15819 145 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 BATF2Q8N1L9 274 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 ADAD2Q8NCV1 583 aaKnown RBP10.15□□□□□ -0.78
UBR4-207ENST00000425413 OR51T1Q8NGJ9 327 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 SGCZQ96LD1 299 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 PDCD10Q9BUL8 212 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 GPR173Q9NS66 373 aa10.15□□□□□ -0.78
UBR4-207ENST00000425413 LOC102725191A0A1B0GVB3 256 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 A0A1W2PNU3 283 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 C9orf172C9J069 976 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 SDCBPO00560 298 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 HTR3BO95264 441 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 CYC1P08574 325 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 MECP2P51608 486 aaKnown RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 TMEM50BP56557 158 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 SEC61A1P61619 476 aaKnown RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 BAMBIQ13145 260 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 PPP1R1AQ13522 171 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 BEX5Q5H9J7 111 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 ZNF529Q6P280 563 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 AAED1Q7RTV5 226 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FAM219AQ8IW50 185 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 CCDC107Q8WV48 283 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 ST8SIA4Q92187 359 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 TMEM54Q969K7 222 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 MRGPRFQ96AM1 343 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 C1orf147Q96MC9 270 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FAM166BA8MTA8 275 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 B4E171 279 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 KCNAB3O43448 404 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 ANGPTL7O43827 346 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 VAMP5O95183 116 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 ACP1P24666 158 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FKBP2P26885 142 aaKnown RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 AVPR2P30518 371 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 TSPAN7P41732 249 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 NPY4RP50391 375 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 LSM6P62312 80 aaKnown RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 KCNMB1Q16558 191 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 GGNQ86UU5 652 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 OR4K15Q8NH41 348 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 MARCH1Q8TCQ1 289 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 PNPLA2Q96AD5 504 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 RADILQ96JH8 1075 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 STRADBQ9C0K7 418 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 SLCO5A1Q9H2Y9 848 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FLVCR1Q9Y5Y0 555 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FAM230AA0A1W2PPH8 454 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 OR14I1A6ND48 311 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 LCATP04180 440 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 PPP3CBP16298 524 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 C4BPBP20851 252 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 CD34P28906 385 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 SRD5A2P31213 254 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 CASRP41180 1078 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 CLDN15P56746 228 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 RAC3P60763 192 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 HGFACQ04756 655 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 DHRS13Q6UX07 377 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 PGAP1Q75T13 922 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 GPR137CQ8N3F9 429 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 KCNG3Q8TAE7 436 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 FGFBP3Q8TAT2 258 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 PTX4Q96A99 478 aa10.14□□□□□ -0.79
UBR4-207ENST00000425413 SLC25A21Q9BQT8 299 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 FOXD3Q9UJU5 478 aaPredicted RBP10.14□□□□□ -0.79
UBR4-207ENST00000425413 MED13Q9UHV7 2174 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 FREM1Q5H8C1 2179 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 A0A0A6YYH2 397 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 A6NJ64 397 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 SGCEO43556 437 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 CD74P04233 296 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 GABRR1P24046 479 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 ITGA3P26006 1051 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 BLVRBP30043 206 aaPredicted RBP10.13□□□□□ -0.79
UBR4-207ENST00000425413 DLSTP36957 453 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 SSBP1Q04837 148 aaKnown RBP10.13□□□□□ -0.79
UBR4-207ENST00000425413 ZNF239Q16600 458 aaKnown RBP10.13□□□□□ -0.79
UBR4-207ENST00000425413 MICBQ29980 383 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 NKAPLQ5M9Q1 402 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 CDCP2Q5VXM1 449 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 PSMF1Q92530 271 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 CXorf58Q96LI9 332 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 SIGLEC12Q96PQ1 595 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 SHOXO15266 292 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms