RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SERPINB10P48595 397 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 MRPL28Q13084 256 aaKnown RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 ADIPOQQ15848 244 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 BEX5Q5H9J7 111 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 MS4A15Q8N5U1 240 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 FGF23Q9GZV9 251 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 OR10A4Q9H209 315 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 SNTG1Q9NSN8 517 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 CISD1Q9NZ45 108 aaKnown RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 CGGBP1Q9UFW8 167 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 TIMM8AO60220 97 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 GPR50Q13585 617 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 AKAP1Q92667 903 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 KCNK15Q9H427 330 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 TREM2Q9NZC2 230 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 TRDV1A0A1B0GX56 115 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 GCH1P30793 250 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 CLDN12P56749 244 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 HSD17B12Q53GQ0 312 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 Q6ZR03 302 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 OR5L1Q8NGL2 311 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 SPSB4Q96A44 273 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 GFI1Q99684 422 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 BCL2L14Q9BZR8 327 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 V9GYS6 101 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 CCL1P22362 96 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 RPS19P39019 145 aaKnown RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 SYNPRQ8TBG9 265 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 FAM230AA0A1W2PPH8 454 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 SRMP19623 302 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 GLRXP35754 106 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 OR8B8Q15620 311 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF718Q3SXZ3 478 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 MOB3CQ70IA8 216 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
PRPF39-202ENST00000424478 PURGQ9UJV8 347 aaKnown RBP11.49□□□□□ -0.57
PRPF39-202ENST00000424478 TRBV5-7A0A0A0MS05 114 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 GMDSO60547 372 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 CALCBP10092 127 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 MAP2K3P46734 347 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 GMFBP60983 142 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 RIPPLY1Q0D2K3 151 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 MADCAM1Q13477 382 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 UNQ9370/PRO34162Q6UXP9 181 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 UBTD1Q9HAC8 227 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 TAAR3PQ9P1P4 343 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 ZSCAN5BA6NJL1 495 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 SPRY3O43610 288 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 UCHL1P09936 223 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 PRDX4Q13162 271 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 PLCXD3Q63HM9 321 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 FBXW12Q6X9E4 464 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 ANGPTL5Q86XS5 388 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 KCTD7Q96MP8 289 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
PRPF39-202ENST00000424478 FLNBO75369 2602 aaKnown RBP11.48□□□□□ -0.57
PRPF39-202ENST00000424478 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 DSCAMO60469 2012 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 F5H5P2 479 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 MLNRO43193 412 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 ICMTO60725 284 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 CD2P06729 351 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 KLF3P57682 345 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-202ENST00000424478 HAVCR1Q96D42 359 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 LIME1Q9H400 295 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 TCF7L1Q9HCS4 588 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 CMAHPQ9Y471 501 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 UNC79Q9P2D8 2635 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 A6NNC1 897 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 MTRF1O75570 445 aaKnown RBP11.47□□□□□ -0.57
PRPF39-202ENST00000424478 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-202ENST00000424478 THBS2P35442 1172 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 MMP15P51511 669 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 GPM6AP51674 278 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 TGIF2LYQ8IUE0 185 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 ACBD4Q8NC06 268 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 HPSE2Q8WWQ2 592 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 PLK3Q9H4B4 646 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 IGKV1-27A0A075B6S5 117 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 LY6HO94772 140 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 NRASP01111 189 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 NKPD1Q17RQ9 610 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 C3orf36Q3SXR2 165 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 HES5Q5TA89 166 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 SERPINA12Q8IW75 414 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 OR2Z1Q8NG97 314 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 CYYR1Q96J86 154 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms