RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 EIF2B1Q14232 305 aaKnown RBP13.34□□□□□ -0.27
COL18A1-205ENST00000423214 MICAQ29983 383 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 GFOD2Q3B7J2 385 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 SLC36A1Q7Z2H8 476 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 VMO1Q7Z5L0 202 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 CMTM4Q8IZR5 234 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 ZNF511Q8NB15 262 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 OR2T33Q8NG76 320 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 OR6N2Q8NGY6 317 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 LRTOMTQ8WZ04 291 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 REEP6Q96HR9 211 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 DDOQ99489 341 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 TSSK6Q9BXA6 273 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 DPAGT1Q9H3H5 408 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 TOR3AQ9H497 397 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 RNPEPL1Q9HAU8 725 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 RPUSD1Q9UJJ7 312 aaKnown RBP13.34□□□□□ -0.27
COL18A1-205ENST00000423214 BAIAP2Q9UQB8 552 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 CAB39Q9Y376 341 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-205ENST00000423214 FAM96BQ9Y3D0 163 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 KPTNQ9Y664 436 aa13.34□□□□□ -0.27
COL18A1-205ENST00000423214 A0A1B0GVI7 797 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 DHRS12A0PJE2 317 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 RIIAD1A6NNX1 92 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 GYG2O15488 501 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 IGHV4-59P01825 116 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 APOC1P02654 83 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 RAP2AP10114 183 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CLUP10909 449 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 MUC1P15941 1255 aaPredicted RBP13.33□□□□□ -0.28
COL18A1-205ENST00000423214 ZNF3P17036 446 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CFL1P23528 166 aaKnown RBP13.33□□□□□ -0.28
COL18A1-205ENST00000423214 BLVRAP53004 296 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CSNK2BP67870 215 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 OCLNQ16625 522 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 WDR38Q5JTN6 314 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 GDPGP1Q6ZNW5 385 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 SLC16A9Q7RTY1 509 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 ADGRG5Q8IZF4 528 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 FTMTQ8N4E7 242 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CANT1Q8WVQ1 401 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 SPSB4Q96A44 273 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 PAPOLGQ9BWT3 736 aaKnown RBP13.33□□□□□ -0.28
COL18A1-205ENST00000423214 MMP27Q9H306 513 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 CNTD2Q9H8S5 307 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 ARMC1Q9NVT9 282 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 DNAJC27Q9NZQ0 273 aa13.33□□□□□ -0.28
COL18A1-205ENST00000423214 NKX6-3A6NJ46 265 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 FCN3O75636 299 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 CST1P01037 141 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 LHBP01229 141 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 FBP1P09467 338 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 NAA10P41227 235 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-205ENST00000423214 SLC25A1P53007 311 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 FAM3AP98173 230 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 SNCBQ16143 134 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 TEX30Q5JUR7 227 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 FAM57BQ71RH2 274 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 WDR86Q86TI4 376 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 ERI1Q8IV48 349 aaKnown RBP13.32□□□□□ -0.28
COL18A1-205ENST00000423214 FAM216BQ8N7L0 139 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 OR1M1Q8NGA1 313 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 OR4Q3Q8NH05 313 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-205ENST00000423214 INTS14Q96SY0 518 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 CCL13Q99616 98 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 NIPSNAP1Q9BPW8 284 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 DNAJB11Q9UBS4 358 aa13.32□□□□□ -0.28
COL18A1-205ENST00000423214 hCG_38984A0A1B0GV85 526 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 A0A1B0GW55 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 NDUFB3O43676 98 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L2P0CJ85 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L3P0CJ86 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L4P0CJ87 422 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L5P0CJ88 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L6P0CJ89 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L7P0CJ90 424 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 IER3P46695 156 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 IKZF1Q13422 519 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 LRRC10Q5BKY1 277 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DHRS7BQ6IAN0 325 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-205ENST00000423214 DUX4L9Q6RFH8 374 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-205ENST00000423214 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 TMEM179BQ7Z7N9 219 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 FGFRL1Q8N441 504 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 CSNK2A3Q8NEV1 391 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 OR10G2Q8NGC3 310 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 OR52H1Q8NGJ2 320 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 H1FXQ92522 213 aaKnown RBP13.31□□□□□ -0.28
COL18A1-205ENST00000423214 OTULINQ96BN8 352 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 C12orf43Q96C57 262 aaKnown RBP13.31□□□□□ -0.28
COL18A1-205ENST00000423214 PGAM5Q96HS1 289 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 MICU1Q9BPX6 476 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 RTL8AQ9BWD3 113 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 NMNAT2Q9BZQ4 307 aa13.31□□□□□ -0.28
COL18A1-205ENST00000423214 OR10A2Q9H208 303 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms