RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SLC3A1Q07837 685 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 RIPPLY1Q0D2K3 151 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 KRT74Q7RTS7 529 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 FTMTQ8N4E7 242 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 OR51A4Q8NGJ6 313 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 OR13G1Q8NGZ3 307 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 DIRC2Q96SL1 478 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 VRK1Q99986 396 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-202ENST00000422991 ISYNA1Q9NPH2 558 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 TMEM100Q9NV29 134 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 ZDHHC8Q9ULC8 765 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 PIGLQ9Y2B2 252 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 RHBDD3Q9Y3P4 386 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF816-ZNF321PA0A0X1KG74 233 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 PNMA8CA0A1B0GUJ8 204 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 SPRY3O43610 288 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 PLPP2O43688 288 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 LMX1BO60663 402 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 CST4P01036 141 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 CD1AP06126 327 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 ZNF12P17014 697 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 CELP19835 753 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 CA6P23280 308 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 MLLT11Q13015 90 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-202ENST00000422991 DEFB113Q30KQ7 82 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 PCGF3Q3KNV8 242 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 UBE2UQ5VVX9 321 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 TSPAN14Q8NG11 270 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 OR2Z1Q8NG97 314 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 OR10AD1Q8NGE0 317 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 GHSRQ92847 366 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 ELMOD3Q96FG2 381 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 OPALINQ96PE5 141 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 ADAT1Q9BUB4 502 aaKnown RBP14.45□□□□□ -0.1
COL7A1-202ENST00000422991 PAPOLGQ9BWT3 736 aaKnown RBP14.45□□□□□ -0.1
COL7A1-202ENST00000422991 GSX2Q9BZM3 304 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 SLC22A4Q9H015 551 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 RAB1BQ9H0U4 201 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 NKIRAS2Q9NYR9 191 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 ENPP5Q9UJA9 477 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 ZNF281Q9Y2X9 895 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 NOP16Q9Y3C1 178 aaKnown RBP14.45□□□□□ -0.1
COL7A1-202ENST00000422991 CELSR1Q9NYQ6 3014 aa14.45□□□□□ -0.1
COL7A1-202ENST00000422991 TANC2Q9HCD6 1990 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 H0YL77 283 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 NCR1O76036 304 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 CD55P08174 381 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 HSMCR30P0CW71 290 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 MAGEB1P43366 347 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 PTH2RP49190 550 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 TSTQ16762 297 aaKnown RBP14.44□□□□□ -0.1
COL7A1-202ENST00000422991 FAM209AQ5JX71 171 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 OR13C3Q8NGS6 347 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 UBASH3BQ8TF42 649 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 FCGR1BQ92637 280 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 TRMT61AQ96FX7 289 aaKnown RBP14.44□□□□□ -0.1
COL7A1-202ENST00000422991 MGLLQ99685 303 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 PLEKHA1Q9HB21 404 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 ITGB1BP2Q9UKP3 347 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 ARID1AO14497 2285 aa14.44□□□□□ -0.1
COL7A1-202ENST00000422991 A0A087WXM4 84 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 GMDSO60547 372 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 NDUFS7O75251 213 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 IGHV4-39P01824 125 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 HLA-DPB1P04440 258 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 ERCC1P07992 297 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 GNALP38405 381 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 RPS11P62280 158 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 PRDX4Q13162 271 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 GPR50Q13585 617 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 TPBGQ13641 420 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 OR8G1Q15617 311 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 YIF1BQ5BJH7 314 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 TMEM42Q69YG0 159 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 OR13C5Q8NGS8 318 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 GPR148Q8TDV2 347 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 NEU4Q8WWR8 484 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 UFD1Q92890 307 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 DVL3Q92997 716 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 C10orf35Q96D05 121 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 ADAT3Q96EY9 351 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 PPP1R3EQ9H7J1 279 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 ABCB9Q9NP78 766 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 ZNF275Q9NSD4 429 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-202ENST00000422991 MPC1Q9Y5U8 109 aa14.43□□□□□ -0.1
COL7A1-202ENST00000422991 TRBV5-5A0A0J9YX44 114 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 A6NIN4 97 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 TRIM64CA6NLI5 447 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 ZNF850A8MQ14 1090 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 F5H5P2 479 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 CPEP16870 476 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 TNFSF4P23510 183 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 EFNA4P52798 201 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 ATP5J2P56134 94 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 CCL8P80075 99 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 TNFAIP6P98066 277 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-202ENST00000422991 SPRNQ5BIV9 151 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 CLVS2Q5SYC1 327 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 LIPKQ5VXJ0 399 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 ZDHHC23Q8IYP9 409 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms