RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SPACA3Q8IXA5 215 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 BMPERQ8N8U9 685 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 GLYATL2Q8WU03 294 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF391Q9UJN7 358 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PTPN13Q12923 2485 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 TUSC2O75896 110 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SLC22A5O76082 557 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PMS2P2O95744 297 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 BGLAPP02818 100 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 MT-ND4P03905 459 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 GIFP27352 417 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PPP1CBP62140 327 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SMIM21Q3B7S5 101 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 FAM27D1Q5T7N8 215 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 LHFPL2Q6ZUX7 228 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 ASCL5Q7RTU5 278 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PIK3IP1Q96FE7 263 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 MPDZO75970 2070 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 NPIPB9F8W1W9 429 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SEMA7AO75326 666 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 TNFAIP6P98066 277 aaPredicted RBP8.62□□□□□ -1.03
CMSS1-201ENST00000421999 MICBQ29980 383 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 MESTQ5EB52 335 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 UBE2NLQ5JXB2 153 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SLC36A1Q7Z2H8 476 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 LRRC20Q8TCA0 184 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 SIGLEC12Q96PQ1 595 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 RAB1BQ9H0U4 201 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 ST3GAL6Q9Y274 331 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 PRELID3BQ9Y3B1 194 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 CACNG2Q9Y698 323 aa8.62□□□□□ -1.03
CMSS1-201ENST00000421999 LRRK1Q38SD2 2015 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 A1L4Q6 167 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 CEBPZOSA8MTT3 80 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 GPX5O75715 221 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 TDGF1P13385 188 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LY6DQ14210 128 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 PEAR1Q5VY43 1037 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ST8SIA4Q92187 359 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 CMBLQ96DG6 245 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 KIRREL1Q96J84 757 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 UBL7Q96S82 380 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 OPA3Q9H6K4 179 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 DNPH1O43598 174 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LIMS3P0CW19 117 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LIMS4P0CW20 117 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 GLI4P10075 376 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF17P17021 662 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 DNASE1P24855 282 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LYPD8Q6UX82 237 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZFAND1Q8TCF1 268 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF431Q8TF32 576 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 PP6455Q8WZ26 134 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 PLPPR2Q96GM1 343 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 RGCCQ9H4X1 137 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ABCA1O95477 2261 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 NOTCH3Q9UM47 2321 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 BORCS7-ASMTA0A0B4J1R7 106 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 KIR2DS1A0A191URI9 304 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ADAM11O75078 769 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 PTP4A3O75365 173 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 KIR2DS4P43632 304 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LIMS1P48059 325 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF133P52736 654 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 KIR2DS1Q14954 304 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 LILRB2Q8N423 598 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 NPEPL1Q8NDH3 523 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 TMEM171Q8WVE6 324 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 HAS2Q92819 552 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 DVL3Q92997 716 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 NKX3-1Q99801 234 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 OPN3Q9H1Y3 402 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 GPR35Q9HC97 309 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 C5orf42Q9H799 3197 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 KIF26BQ2KJY2 2108 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 NAP1L6A6NFF2 107 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 THY1P04216 161 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 HOXD4P09016 255 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 RPS19P39019 145 aaKnown RBP8.61□□□□□ -1.03
CMSS1-201ENST00000421999 GDNFP39905 211 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF81P51508 661 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 DOC2BQ14184 412 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 PLXDC2Q6UX71 529 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 CREB3L2Q70SY1 520 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 BEST4Q8NFU0 473 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 HGDQ93099 445 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 DOK1Q99704 481 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 FN3KRPQ9HA64 309 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 SLC7A10Q9NS82 523 aa8.61□□□□□ -1.03
CMSS1-201ENST00000421999 TREM2Q9NZC2 230 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms