RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PARPBPQ9NWS1 579 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 ATMQ13315 3056 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 SSX5O60225 188 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 IL5P05113 134 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 SSR4P51571 173 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 MTCP1P56278 107 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 TMEM50BP56557 158 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 ABHD3Q8WU67 409 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
MCF2L-213ENST00000421756 SRXN1Q9BYN0 137 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
MCF2L-213ENST00000421756 GABRA1P14867 456 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 CPN1P15169 458 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 DUSP1P28562 367 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 RGS19P49795 217 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PCOLCEQ15113 449 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 CLLU1Q5K131 121 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 ZNF660Q6AZW8 331 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 KMT5CQ86Y97 462 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 SPERTQ8NA61 448 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 MRPL13Q9BYD1 178 aaKnown RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PLEKHJ1Q9NW61 149 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 hCG_1807616A0A1W2PRN6 198 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 MEX3AA1L020 520 aaKnown RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 NXPH3O95157 252 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PMS2P2O95744 297 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 RRASP10301 218 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 MGMTP16455 207 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 M6PRP20645 277 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 C4BPBP20851 252 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 UBE2V2Q15819 145 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 ELP5Q8TE02 316 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 TTC9Q92623 222 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 CSAG2Q9Y5P2 127 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 M0R135 149 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 CDC14BO60729 498 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 ITGB2P05107 769 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 GDF1P27539 372 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PTGS2P35354 604 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 RBMXP38159 391 aaKnown RBP11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PDZD9Q8IXQ8 264 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 TMEM229BQ8NBD8 167 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 PIGCQ92535 297 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 ZNF799Q96GE5 643 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 FAAP24Q9BTP7 215 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 NPTNQ9Y639 398 aa11.74□□□□□ -0.53
MCF2L-213ENST00000421756 C9orf170A2RU37 121 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 D6RAR5 112 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 OR2A4O95047 310 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-213ENST00000421756 CSTBP04080 98 aaKnown RBP11.73□□□□□ -0.53
MCF2L-213ENST00000421756 ZNF17P17021 662 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 FDX2Q6P4F2 183 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 PNLDC1Q8NA58 520 aaKnown RBP11.73□□□□□ -0.53
MCF2L-213ENST00000421756 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 PHB2Q99623 299 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 ACACAQ13085 2346 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 FBXO24O75426 580 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 AQP8O94778 261 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 SERPINA5P05154 406 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 NTF4P34130 210 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 FOLR3P41439 243 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 CHRFAM7AQ494W8 412 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 TMED6Q8WW62 240 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 PRRT1Q99946 306 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 FN3KRPQ9HA64 309 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 IGKV1D-8A0A087WSZ0 117 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 LINC00862A6NCI5 91 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 MSR1P21757 451 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 HTR5AP47898 357 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 PCK2Q16822 640 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 ATRAIDQ6UW56 229 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 FBXW5Q969U6 566 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 LYZL4Q96KX0 146 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
MCF2L-213ENST00000421756 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-213ENST00000421756 DHHO43323 396 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 P04436 131 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 ASCL1P50553 236 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 SLC35A1P78382 337 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 PMS2CLQ68D20 193 aa11.72□□□□□ -0.53
MCF2L-213ENST00000421756 RAB12Q6IQ22 244 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms