RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 POLEQ07864 2286 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 TANC2Q9HCD6 1990 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 HIVEP3Q5T1R4 2406 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 HCFC1P51610 2035 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 BSNQ9UPA5 3926 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ANKHD1Q8IWZ3 2542 aaKnown RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PLCE1Q9P212 2302 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 LOC100509620A0A075B734 347 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 A0A1W2PR80 420 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 J3QRK9 145 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CTDSP2O14595 271 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ICMTO60725 284 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 BPNT1O95861 308 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 EIF4EP06730 217 aaKnown RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 UBBP0CG47 229 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CBR1P16152 277 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 SELEP16581 610 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ADRA2CP18825 462 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PRKACBP22694 351 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CCKARP32238 428 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF93P35789 620 aaPredicted RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 POU3F4P49335 361 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 INPP1P49441 399 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PPP5CP53041 499 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 DEFA1P59665 94 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 DEFA3P59666 94 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PPP1CBP62140 327 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PMPCAQ10713 525 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 RIN1Q13671 783 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PPA1Q15181 289 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 P2RY14Q15391 338 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 TSC22D1Q15714 1073 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 FAM189A2Q15884 450 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF181Q2M3W8 571 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 C3orf36Q3SXR2 165 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CLVS2Q5SYC1 327 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 MTFR2Q6P444 385 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 COLCA1Q6ZS62 124 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 Q6ZSR3 168 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 LHFPL2Q6ZUX7 228 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF584Q8IVC4 421 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CDH26Q8IXH8 852 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 C1orf174Q8IYL3 243 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZDHHC23Q8IYP9 409 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 FAM169BQ8N8A8 192 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF610Q8N9Z0 462 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 RELL2Q8NC24 303 aaPredicted RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CPEB3Q8NE35 698 aaKnown RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 UBASH3BQ8TF42 649 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 NPRL2Q8WTW4 380 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 C15orf40Q8WUR7 153 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 RAB40AQ8WXH6 277 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 PIGTQ969N2 578 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 S100PBPQ96BU1 408 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 BORCS8Q96FH0 119 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 LYZL4Q96KX0 146 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 DMRTA2Q96SC8 542 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 S100A13Q99584 98 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 GFI1Q99684 422 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ACTR6Q9GZN1 396 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CST11Q9H112 138 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 OR10A4Q9H209 315 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 MIXL1Q9H2W2 232 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 OR51B6Q9H340 312 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 TBCCD1Q9NVR7 557 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 B3GNT2Q9NY97 397 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ELOVL5Q9NYP7 299 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 COQ3Q9NZJ6 369 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF319Q9P2F9 582 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 CGGBP1Q9UFW8 167 aaPredicted RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 SLC7A11Q9UPY5 501 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 MEMO1Q9Y316 297 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 NOP16Q9Y3C1 178 aaKnown RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 V9GYH0 126 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 ITPR1Q14643 2758 aa5.16□□□□□ -1.58
HMGB3-202ENST00000419110 DSPP15924 2871 aaKnown RBP5.16□□□□□ -1.58
HMGB3-202ENST00000419110 SPENQ96T58 3664 aaKnown RBP5.15□□□□□ -1.58
HMGB3-202ENST00000419110 A0A0B4J203 849 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 C5orf63A6NC05 138 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A27PA6NNH2 459 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ANKRD30BLA7E2S9 258 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 VGLL3A8MV65 326 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 M0R1B8 84 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CCL21O00585 134 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 UPK1BO75841 260 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ALX3O95076 343 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PAHP00439 452 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 IGLV1-44P01699 117 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ALDOBP05062 364 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CELA3BP08861 270 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CECR9P0C854 216 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 FAM157BP0CG42 384 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CCL2P13500 99 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ARSBP15848 533 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PPP3CBP16298 524 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TUBG1P23258 451 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ANOS1P23352 680 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ACKR3P25106 362 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms