RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DUX4L3P0CJ86 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L4P0CJ87 422 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L5P0CJ88 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L6P0CJ89 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L7P0CJ90 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 ZNF3P17036 446 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 ATP6V1B2P21281 511 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 NAA10P41227 235 aaPredicted RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 IER3P46695 156 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 PPP1R8Q12972 351 aaKnown RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 GFOD2Q3B7J2 385 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L9Q6RFH8 374 aaPredicted RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 CMTM4Q8IZR5 234 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 FGFRL1Q8N441 504 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 RNF133Q8WVZ7 376 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 LRTOMTQ8WZ04 291 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 C12orf43Q96C57 262 aaKnown RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 INTS14Q96SY0 518 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 MMP27Q9H306 513 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DNAJC27Q9NZQ0 273 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4Q9UBX2 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.5
PAF1-202ENST00000416728 U3KQV3 271 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 ANXA2P2A6NMY6 339 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 GPR37O15354 613 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 NDUFB3O43676 98 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 GSK3AP49840 483 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 ZNF121P58317 390 aaPredicted RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 SNCBQ16143 134 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 LINC01590Q5TEZ4 76 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 ERI1Q8IV48 349 aaKnown RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 DMRTB1Q96MA1 342 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 MICU1Q9BPX6 476 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 DGCR6LQ9BY27 220 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 REEP1Q9H902 201 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
PAF1-202ENST00000416728 PRPF19Q9UMS4 504 aaKnown RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 SAMHD1Q9Y3Z3 626 aaKnown RBP11.89□□□□□ -0.51
PAF1-202ENST00000416728 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 FAM183AA6NL82 134 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 ACOT8O14734 319 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 CDIPTO14735 213 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 FBP1P09467 338 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 GSTT1P30711 240 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 IL5RAQ01344 420 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 IKZF1Q13422 519 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 MICAQ29983 383 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 KLHL12Q53G59 568 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 METAP1DQ6UB28 335 aaPredicted RBP11.88□□□□□ -0.51
PAF1-202ENST00000416728 GDPGP1Q6ZNW5 385 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 RHOUQ7L0Q8 258 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 SHFQ7M4L6 423 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 PRSS45Q7RTY3 260 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 GALNT4Q8N4A0 578 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 TEX47Q8TBZ9 253 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 UBE2FQ969M7 185 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 SEH1LQ96EE3 360 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 RGCCQ9H4X1 137 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 MAGIXQ9H6Y5 334 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 PPP1R3EQ9H7J1 279 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 BRD7Q9NPI1 651 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 VNN3Q9NY84 501 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 ARL2BPQ9Y2Y0 163 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
PAF1-202ENST00000416728 TCRBV5S2A0A599 114 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 DCTN3O75935 186 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 CLPXO76031 633 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 H2BFMP0C1H6 154 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 EEF1B2P24534 225 aaKnown RBP11.87□□□□□ -0.51
PAF1-202ENST00000416728 OPRL1P41146 370 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 MNAT1P51948 309 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 PROK1P58294 105 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 GMFBP60983 142 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 TAF9Q16594 264 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 STUMQ69YW2 141 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 OR2T5Q6IEZ7 315 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 OR2T29Q8NH02 315 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 NPRL2Q8WTW4 380 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 ITPKCQ96DU7 683 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms