RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 MARCH1Q8TCQ1 289 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 MAGT1Q9H0U3 335 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 MTCH2Q9Y6C9 303 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 PTPRFP10586 1907 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 ZNF236Q9UL36 1845 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 ABCA7Q8IZY2 2146 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 MPZL1O95297 269 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 RAF1P04049 648 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 TLE1Q04724 770 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 HAGHQ16775 308 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 OR2A2Q6IF42 318 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 GABRG1Q8N1C3 465 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 LRP5LA4QPB2 252 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 TRA2AQ13595 282 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL12A1-203ENST00000416123 CDK5R1Q15078 307 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 SVBPQ8N300 66 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 MCHR2Q969V1 340 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 OIP5O43482 229 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 MGMTP16455 207 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 SDHBP21912 280 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 PPIL1Q9Y3C6 166 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 XRCC3O43542 346 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 S100A11P31949 105 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 NXPH1P58417 271 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 SNRPNP63162 240 aaKnown RBP9.54□□□□□ -0.88
COL12A1-203ENST00000416123 OR2T2Q6IF00 324 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 S1PR3Q99500 378 aa9.54□□□□□ -0.88
COL12A1-203ENST00000416123 IGLV3-16A0A075B6K0 115 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ERHP84090 104 aaKnown RBP9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ZNF774Q6NX45 483 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 RNF141Q8WVD5 230 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SEH1LQ96EE3 360 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SBF1O95248 1867 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ASXL3Q9C0F0 2248 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SPAARA0A1B0GVQ0 90 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 IFITM5A6NNB3 132 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ARPC3O15145 178 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 DBX2Q6ZNG2 339 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 TNFSF14O43557 240 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 CD3DP04234 171 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 GALNSP34059 522 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SMIM21Q3B7S5 101 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ZNF75AQ96N20 296 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 DDOQ99489 341 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 LHX9Q9NQ69 397 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 LRP3O75074 770 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 OR2F2O95006 317 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 CNR1P21554 472 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 AQP6Q13520 282 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SPACA1Q9HBV2 294 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 TMEM200CA6NKL6 621 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SOX15O60248 233 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 SULT1C4O75897 302 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 OR4S1Q8NGB4 309 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ERGIC1Q969X5 290 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 TXN2Q99757 166 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 C3orf80F5H4A9 247 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 F6UZH7 168 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 COX14Q96I36 57 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 LIN7CQ9NUP9 197 aaKnown RBP9.53□□□□□ -0.88
COL12A1-203ENST00000416123 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 PDGFAP04085 211 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 JUNBP17275 347 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ZNF439Q8NDP4 499 aa9.53□□□□□ -0.88
COL12A1-203ENST00000416123 ARID1AO14497 2285 aa9.52□□□□□ -0.88
COL12A1-203ENST00000416123 ZXDAP98168 799 aa9.52□□□□□ -0.88
COL12A1-203ENST00000416123 OR2A5Q96R48 311 aa9.52□□□□□ -0.88
COL12A1-203ENST00000416123 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 CTXN2P0C2S0 81 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 FOXL2P58012 376 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 ARHGDIGQ99819 225 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 GABRG3Q99928 467 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 THADAQ6YHU6 1953 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 OR5H15A6NDH6 313 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
COL12A1-203ENST00000416123 ZNF205O95201 554 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 RNPS1Q15287 305 aaKnown RBP9.52□□□□□ -0.89
COL12A1-203ENST00000416123 PLAC9Q5JTB6 97 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 YIPF5Q969M3 257 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 TVP23CQ96ET8 276 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 JAM3Q9BX67 310 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 CDCA4Q9BXL8 241 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 DNAJB12Q9NXW2 375 aaKnown RBP9.52□□□□□ -0.89
COL12A1-203ENST00000416123 KLK11Q9UBX7 282 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 TRGV10A0A0A0MS01 117 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 DCTDP32321 178 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 AK3Q9UIJ7 227 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 KCNE1BA0A087WTH5 132 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 OR5H14A6NHG9 310 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 HRKO00198 91 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 CD1EP15812 388 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 ATF1P18846 271 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 PAX6P26367 422 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 FUT6P51993 359 aa9.52□□□□□ -0.89
COL12A1-203ENST00000416123 PRDX4Q13162 271 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms