RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 HIPK2Q9H2X6 1198 aa11.61□□□□□ -0.55
SCN1B-202ENST00000415950 MEX3AA1L020 520 aaKnown RBP11.6□□□□□ -0.55
SCN1B-202ENST00000415950 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 AQP7P3A6NL99 342 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 HRKO00198 91 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 ICOSLGO75144 302 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 MYF5P13349 255 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 CASP6P55212 293 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 DCAF12L2Q5VW00 463 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 OR2T2Q6IF00 324 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 RNF165Q6ZSG1 346 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 SFTPA2Q8IWL1 248 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 RTN4IP1Q8WWV3 396 aaPredicted RBP11.6□□□□□ -0.55
SCN1B-202ENST00000415950 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 SMIM7Q9BQ49 75 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 RAB9BQ9NP90 201 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 EXOGQ9Y2C4 368 aaKnown RBP11.6□□□□□ -0.55
SCN1B-202ENST00000415950 PCDHGA9Q9Y5G4 932 aaKnown RBP11.6□□□□□ -0.55
SCN1B-202ENST00000415950 DEGS1O15121 323 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 EFNB2P52799 333 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 CD300LDQ6UXZ3 194 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 DBX2Q6ZNG2 339 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 DOK3Q7L591 496 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 PPP1R14DQ9NXH3 145 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 OPN4Q9UHM6 478 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 LAMP3Q9UQV4 416 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 TLCD2A6NGC4 264 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF814B7Z6K7 855 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 MPC2O95563 127 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 DEFB108BQ8NET1 73 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 NAT6Q93015 286 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 MUCL1Q96DR8 90 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 TDRD6O60522 2096 aaKnown RBP11.6□□□□□ -0.55
SCN1B-202ENST00000415950 CACNA1HO95180 2353 aa11.6□□□□□ -0.55
SCN1B-202ENST00000415950 A0A096LPE4 126 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 A0A0B4J2E0 115 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 A0A1B0GX12 115 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 A0A1W2PPZ6 126 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FAM166BA8MTA8 275 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 G0S2P27469 103 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF133P52736 654 aaPredicted RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF90Q03938 601 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 C19orf57Q0VDD7 668 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 MISPQ8IVT2 679 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 LYRM4Q9HD34 91 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 EP400Q96L91 3159 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 C4orf47A7E2U8 309 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 M0R135 149 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 EIF1BO60739 113 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ALOX12BO75342 701 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 CD96P40200 585 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 KCNJ3P48549 501 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 PIGPP57054 158 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ELAVL1Q15717 326 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF528Q3MIS6 628 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 RPS19BP1Q86WX3 136 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 GCNT2Q8N0V5 402 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZPLD1Q8TCW7 415 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF799Q96GE5 643 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FLRT3Q9NZU0 649 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FCER1GP30273 86 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 CDAP32320 146 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 GFERP55789 205 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 PRAMEF5Q5TYX0 476 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF626Q68DY1 528 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 CA13Q8N1Q1 262 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 H1FXQ92522 213 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 ZC3HAV1LQ96H79 300 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 LINC00615Q96LM1 132 aaPredicted RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 VPS25Q9BRG1 176 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 MTCH1Q9NZJ7 389 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 LHX6Q9UPM6 363 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 LINC00862A6NCI5 91 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 SLC17A2O00624 439 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 CTAG2O75638 210 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 MRPS21P82921 87 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FAM74A3Q4VXF1 159 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 WDR88Q6ZMY6 472 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FAM24BQ8N5W8 94 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 PLPPR2Q96GM1 343 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 RPP25Q9BUL9 199 aaKnown RBP11.59□□□□□ -0.55
SCN1B-202ENST00000415950 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
SCN1B-202ENST00000415950 IGHV3-15A0A0B4J1V0 119 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 PRSS37A4D1T9 235 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF587BE7ETH6 402 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TRAF3IP2O43734 574 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms