RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 OR2T4Q8NH00 348 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 SSX3Q99909 188 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 COPS4Q9BT78 406 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
DDX56-202ENST00000415758 FAM234AQ9H0X4 552 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 HAO2Q9NYQ3 351 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 SAMD4AQ9UPU9 718 aaKnown RBP12.56□□□□□ -0.4
DDX56-202ENST00000415758 FOXJ3Q9UPW0 622 aa12.56□□□□□ -0.4
DDX56-202ENST00000415758 CDIPTO14735 213 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 GADD45GO95257 159 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 SLC2A1P11166 492 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 PYCR1P32322 319 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 CAV3P56539 151 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 CSNK2BP67870 215 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 TEX30Q5JUR7 227 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 SLC35F1Q5T1Q4 408 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 HCP5Q6MZN7 132 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 OR4C13Q8NGP0 309 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 OR9Q1Q8NGQ5 310 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 OR10Z1Q8NGY1 313 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 OR2T6Q8NHC8 308 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 MRAPQ8TCY5 172 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 MED30Q96HR3 178 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 KCTD14Q9BQ13 255 aaPredicted RBP12.55□□□□□ -0.4
DDX56-202ENST00000415758 EFCAB1Q9HAE3 211 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 FGFR1OP2Q9NVK5 253 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 ABCD2Q9UBJ2 740 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 COMMD3-BMI1R4GMX3 469 aa12.55□□□□□ -0.4
DDX56-202ENST00000415758 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 TVP23AA6NH52 213 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 XPNPEP2O43895 674 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 COX4I1P13073 169 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 SELLP14151 372 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 IFNGR2P38484 337 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 TSPAN31Q12999 210 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 TAF13Q15543 124 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 FAM76BQ5HYJ3 339 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 GLYATQ6IB77 296 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 FAM86B1Q8N7N1 296 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 OR5T2Q8NGG2 359 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
DDX56-202ENST00000415758 ITPKCQ96DU7 683 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
DDX56-202ENST00000415758 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
DDX56-202ENST00000415758 SLC25A10Q9UBX3 287 aaPredicted RBP12.54□□□□□ -0.4
DDX56-202ENST00000415758 SF3B6Q9Y3B4 125 aaKnown RBP12.54□□□□□ -0.4
DDX56-202ENST00000415758 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 MEGF11A6BM72 1044 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 SEMG1P04279 462 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 CFL1P23528 166 aaKnown RBP12.53□□□□□ -0.4
DDX56-202ENST00000415758 SLC15A1P46059 708 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 ENTPD1P49961 510 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
DDX56-202ENST00000415758 MXRA7P84157 204 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 EMX1Q04741 257 aaPredicted RBP12.53□□□□□ -0.4
DDX56-202ENST00000415758 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■□□ 19.1
DDX56-202ENST00000415758 BLMHQ13867 455 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 DGUOKQ16854 277 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 KLHL12Q53G59 568 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 PRSS45Q7RTY3 260 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 OR51G2Q8NGK0 314 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 OR5D13Q8NGL4 314 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 GAFA1Q96PS6 74 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 GORASP2Q9H8Y8 452 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 SP140LQ9H930 580 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 CENPMQ9NSP4 180 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
DDX56-202ENST00000415758 NKX6-3A6NJ46 265 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 ZNF593O00488 134 aaPredicted RBP12.52□□□□□ -0.41
DDX56-202ENST00000415758 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 ACAA1P09110 424 aaPredicted RBP12.52□□□□□ -0.41
DDX56-202ENST00000415758 SPARCP09486 303 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 FMO3P31513 532 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 GSK3AP49840 483 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 IL5RAQ01344 420 aa12.52□□□□□ -0.41
DDX56-202ENST00000415758 SNCBQ16143 134 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms