RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 IGHV3-64DA0A0J9YX35 117 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 IRGMA1A4Y4 181 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 E9PQ18 207 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 H0YHG0 523 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 FOXH1O75593 365 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 APOL3O95236 402 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 FSTL3O95633 263 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 CYB5R3P00387 301 aaPredicted RBP12.39□□□□□ -0.43
CHD1-202ENST00000414220 IFNA2P01563 188 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 ACTA2P62736 377 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 ACTG2P63267 376 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 IL18R1Q13478 541 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 PRAMEF6Q5VXH4 476 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 LIPNQ5VXI9 398 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 KCTD8Q6ZWB6 473 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 NLRC3Q7RTR2 1065 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 ZDHHC23Q8IYP9 409 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 OR51E1Q8TCB6 317 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 TMEM186Q96B77 213 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 FAM71F1Q96KD3 344 aaPredicted RBP12.39□□□□□ -0.43
CHD1-202ENST00000414220 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
CHD1-202ENST00000414220 INPP5EQ9NRR6 644 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 MIOXQ9UGB7 285 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 GNG8Q9UK08 70 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 EXOGQ9Y2C4 368 aaKnown RBP12.39□□□□□ -0.43
CHD1-202ENST00000414220 RHBDD3Q9Y3P4 386 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 ABCA1O95477 2261 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 A0A1B0GVI7 797 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 TMEM210A6NLX4 147 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 ZNF850A8MQ14 1090 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 WNT9BO14905 357 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 DHRS3O75911 302 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 PTBP3O95758 552 aaKnown RBP12.38□□□□□ -0.43
CHD1-202ENST00000414220 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
CHD1-202ENST00000414220 DBTP11182 482 aaKnown RBP12.38□□□□□ -0.43
CHD1-202ENST00000414220 ZNF12P17014 697 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 PEX2P28328 305 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 RAB40BQ12829 278 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 PRDX4Q13162 271 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 DOK3Q7L591 496 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 EGFL6Q8IUX8 553 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 RNF170Q96K19 258 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 RNPEPL1Q9HAU8 725 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 HIF1ANQ9NWT6 349 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 C1orf123Q9NWV4 160 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 CHD3Q12873 2000 aaKnown RBP12.38□□□□□ -0.43
CHD1-202ENST00000414220 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
CHD1-202ENST00000414220 MTORP42345 2549 aa12.38□□□□□ -0.43
CHD1-202ENST00000414220 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 DHRS7CA6NNS2 312 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 FAM157AC9JC47 383 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 MAGEB4O15481 346 aaPredicted RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 NDUFA2O43678 99 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 FAM20BO75063 409 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 TTRP02766 147 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 RPS2P15880 293 aaKnown RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 GABRB1P18505 474 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 ANOS1P23352 680 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 GATA3P23771 443 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 ELF3P78545 371 aaPredicted RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 ZNF91Q05481 1191 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 SLC34A1Q06495 639 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 MRPL28Q13084 256 aaKnown RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 MED21Q13503 144 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 ZMYND11Q15326 602 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 MPPED2Q15777 294 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 ESCO2Q56NI9 601 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 OGFRL1Q5TC84 451 aaPredicted RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 SSX6Q7RTT6 188 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 RFLNBQ8N5W9 214 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 OR1M1Q8NGA1 313 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 HAVCR2Q8TDQ0 301 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 DVL3Q92997 716 aaPredicted RBP12.37□□□□□ -0.43
CHD1-202ENST00000414220 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 SOX7Q9BT81 388 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 VCX3BQ9H321 246 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 PLEKHA1Q9HB21 404 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
CHD1-202ENST00000414220 A0A0G2JMP0 313 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 A0A0X1KG70 313 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 PRR32B1ATL7 298 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 H0YAE9 185 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 SYT7O43581 403 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 PLPP2O43688 288 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 PNPP00491 289 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 SERPINA3P01011 423 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 UBCP0CG48 685 aaKnown RBP12.36□□□□□ -0.43
CHD1-202ENST00000414220 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
CHD1-202ENST00000414220 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
CHD1-202ENST00000414220 ZNF85Q03923 595 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 MFGE8Q08431 387 aaPredicted RBP12.36□□□□□ -0.43
CHD1-202ENST00000414220 SCGB2A2Q13296 93 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 CR1LQ2VPA4 569 aa12.36□□□□□ -0.43
CHD1-202ENST00000414220 CDONQ4KMG0 1287 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms