RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 DFFAO00273 331 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCL21O00585 134 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCL22O00626 93 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TRDMT1O14717 391 aaKnown RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD5LO43866 347 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 C2P06681 752 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 SNRPAP09012 282 aaKnown RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CNR1P21554 472 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCR2P41597 374 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 UBE2AP49459 152 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 SERPINB8P50452 374 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 SERPINB9P50453 376 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCR8P51685 355 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 FBXW4P57775 412 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TAS2R39P59534 338 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPS24P62847 133 aaKnown RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ELF3P78545 371 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZBED5Q49AG3 693 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 C6orf226Q5I0X4 101 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 N4BP2L1Q5TBK1 243 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM71E1Q6IPT2 247 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CNIH2Q6PI25 160 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 UQCC3Q6UW78 93 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 PID1Q7Z2X4 250 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TGIF2LXQ8IUE1 241 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CTAGE3PQ8IX95 158 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 C10orf67Q8IYJ2 551 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 KIF2BQ8N4N8 673 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ATPAF2Q8N5M1 289 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ARL6IP6Q8N6S5 226 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 LKAAEAR1Q8TD35 194 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ACMSDQ8TDX5 336 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZFP90Q8TF47 636 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 C2orf15Q8WU43 125 aaKnown RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 KCTD4Q8WVF5 259 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TOP1MTQ969P6 601 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 PLEKHA8Q96JA3 519 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 BTN2A3PQ96KV6 586 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TSSK3Q96PN8 268 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 TBL1YQ9BQ87 522 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 OSBPL10Q9BXB5 764 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZYG11BQ9C0D3 744 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 NSRP1Q9H0G5 558 aaKnown RBP2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 FBXO44Q9H4M3 255 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 NT5MQ9NPB1 228 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CHRAC1Q9NRG0 131 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 ARL2BPQ9Y2Y0 163 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CEP350Q5VT06 3117 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 CEP192Q8TEP8 1941 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 IGHV3-66A0A0C4DH42 116 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 A0A0U1RQS6 177 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM240BA0A1B0GVZ2 78 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF726A6NNF4 738 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 A8MT66 165 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 UBFD1O14562 309 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 COPEO14579 308 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 BIRC5O15392 142 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF189O75820 626 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 GAPDHP04406 335 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 SERPINE1P05121 402 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 MYL2P10916 166 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ATP1B2P14415 290 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ETS2P15036 469 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 NQO1P15559 274 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF823P16415 610 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OGNP20774 298 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLC2A5P22732 501 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 CSKP41240 450 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 CDKN2DP55273 166 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ARPP19P56211 112 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPS21P63220 83 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 XIAPP98170 497 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 GNA12Q03113 381 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 TWF1Q12792 350 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 CDH17Q12864 832 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLAQ13239 276 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 POU6F1Q14863 301 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 CTSL3PQ5NE16 218 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 PDPK2PQ6A1A2 396 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF470Q6ECI4 717 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 RWDD4Q6NW29 188 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZYG11AQ6WRX3 759 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 LRRC74BQ6ZQY2 392 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM43BQ6ZT52 329 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 BZW1Q7L1Q6 419 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 DEFB128Q7Z7B8 93 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 LHFPL3Q86UP9 236 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 C10orf107Q8IVU9 208 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 TBC1D21Q8IYX1 336 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 PUSL1Q8N0Z8 303 aaKnown RBP2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ARHGAP18Q8N392 663 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM86B1Q8N7N1 296 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 C15orf56Q8N910 161 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR10G2Q8NGC3 310 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR10G4Q8NGN3 311 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR13C4Q8NGS5 318 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF461Q8TAF7 563 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 RAB3IL1Q8TBN0 382 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLC22A8Q8TCC7 542 aa2.2□□□□□ -2.06
HMGB1P11-201ENST00000413899 DYDC1Q8WWB3 177 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms