RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 OR1F12Q8NHA8 337 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 FAHD2AQ96GK7 314 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 GPR137Q96N19 417 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 GPER1Q99527 375 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 EXO5Q9H790 373 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF69Q9UC07 566 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
LIMS1-205ENST00000410093 MGAT4AQ9UM21 535 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 FLVCR2Q9UPI3 526 aa11.91□□□□□ -0.5
LIMS1-205ENST00000410093 DMXL2Q8TDJ6 3036 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF724A8MTY0 619 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 RPL36A-HNRNPH2H7BZ11 118 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 NAT2P11245 290 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 ABOP16442 354 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 NAT1P18440 290 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 CXCL3P19876 107 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 PRKACBP22694 351 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 ITGA3P26006 1051 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
LIMS1-205ENST00000410093 DHODHQ02127 395 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 GK2Q14410 553 aaPredicted RBP11.9□□□□□ -0.5
LIMS1-205ENST00000410093 RNPS1Q15287 305 aaKnown RBP11.9□□□□□ -0.5
LIMS1-205ENST00000410093 RNASE10Q5GAN6 216 aaKnown RBP11.9□□□□□ -0.5
LIMS1-205ENST00000410093 CLVS2Q5SYC1 327 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 SPINK14Q6IE38 97 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 SLC16A14Q7RTX9 510 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 DPPA2Q7Z7J5 298 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 NAA40Q86UY6 237 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 FAM89BQ8N5H3 189 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
LIMS1-205ENST00000410093 HAS2Q92819 552 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 FBXO17Q96EF6 278 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 S100A13Q99584 98 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 FOXB1Q99853 325 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 TMEM59Q9BXS4 323 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 CRLF2Q9HC73 371 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 IFT46Q9NQC8 304 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF319Q9P2F9 582 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 MGAT4CQ9UBM8 478 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 ANAPC10Q9UM13 185 aa11.9□□□□□ -0.5
LIMS1-205ENST00000410093 PCSK5Q92824 1860 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
LIMS1-205ENST00000410093 OR5H15A6NDH6 313 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CDC14BO60729 498 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 RLN1P04808 185 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 SLC2A1P11166 492 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CD46P15529 392 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CLDN15P56746 228 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 IKZF1Q13422 519 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CNN3Q15417 329 aaKnown RBP11.89□□□□□ -0.51
LIMS1-205ENST00000410093 KISS1Q15726 138 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 IDO2Q6ZQW0 420 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CHMP1BQ7LBR1 199 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 TRAPPC6BQ86SZ2 158 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 ACBD4Q8NC06 268 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 CHST4Q8NCG5 386 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 SEMA6DQ8NFY4 1073 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 LILRB4Q8NHJ6 448 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 RAB3CQ96E17 227 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 SCGB3A2Q96PL1 93 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 LPAR5Q9H1C0 372 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 KCNK15Q9H427 330 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 GPR35Q9HC97 309 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 GP6Q9HCN6 339 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM82A0PJX8 343 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 PMS2P1A4D2B8 440 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 H3BUI4 141 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 XRCC2O43543 280 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 NME2P1O60361 137 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
LIMS1-205ENST00000410093 AMY2AP04746 511 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 TPOP07202 933 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 COX5BP10606 129 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF708P17019 499 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
LIMS1-205ENST00000410093 NME2P22392 152 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 PTGFRP43088 359 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 LHX2P50458 406 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 GNG2P59768 71 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 ZP1P60852 638 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 GMFBP60983 142 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 RSPO1Q2MKA7 263 aaPredicted RBP11.88□□□□□ -0.51
LIMS1-205ENST00000410093 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 FJX1Q86VR8 437 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 SULF2Q8IWU5 870 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 IL22RA1Q8N6P7 574 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 OR2T35Q8NGX2 323 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 SNAPC3Q92966 411 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 NKD1Q969G9 470 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms