RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 THAP6Q8TBB0 222 aa13.97□□□□□ -0.17
HOXD3-202ENST00000410016 ZNF471Q9BX82 626 aaPredicted RBP13.97□□□□□ -0.17
HOXD3-202ENST00000410016 PROK2Q9HC23 129 aa13.97□□□□□ -0.17
HOXD3-202ENST00000410016 FRYLO94915 3013 aa13.97□□□□□ -0.17
HOXD3-202ENST00000410016 TRBV6-7A0A0A0MS04 114 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 KCNAB3O43448 404 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 CRTAPO75718 401 aaPredicted RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 CD63P08962 238 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 FGF5P12034 268 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 PSMB6P28072 239 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ALDH3B1P43353 468 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 DHPSP49366 369 aaPredicted RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ZNF133P52736 654 aaPredicted RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ECH1Q13011 328 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ENDOGQ14249 297 aaKnown RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 KISS1Q15726 138 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 C10orf128Q5T292 105 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 NTNG2Q96CW9 530 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 LIN37Q96GY3 246 aaPredicted RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 GNRHR2Q96P88 292 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 ZNF385AQ96PM9 386 aaKnown RBP13.96□□□□□ -0.17
HOXD3-202ENST00000410016 GPER1Q99527 375 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 WDR54Q9H977 334 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 GLS2Q9UI32 602 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 DMDP11532 3685 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 PI4KAP42356 2102 aa13.96□□□□□ -0.17
HOXD3-202ENST00000410016 TRIM77I1YAP6 450 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 SERPINF1P36955 418 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 PTGFRP43088 359 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 STARP49675 285 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 NPY4RP50391 375 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 TAS2R31P59538 309 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 B2MP61769 119 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 HLA-BQ31612 363 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 PAN3Q58A45 887 aaKnown RBP13.96□□□□□ -0.18
HOXD3-202ENST00000410016 TMEM54Q969K7 222 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 NABP1Q96AH0 204 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 RNF126Q9BV68 326 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 NELFAQ9H3P2 528 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 LDAHQ9H6V9 325 aa13.96□□□□□ -0.18
HOXD3-202ENST00000410016 EML6Q6ZMW3 1958 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 A0A087WZY1 265 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 IGHV1-45A0A0A0MS14 117 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 ZIC3O60481 467 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 UMODP07911 640 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 CNR1P21554 472 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 MSR1P21757 451 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 UBE2V2Q15819 145 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 ACTBL2Q562R1 376 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 FOXL2NBQ6ZUU3 175 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 LHFPL1Q86WI0 220 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 RTBDNQ9BSG5 229 aaPredicted RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 URM1Q9BTM9 101 aaKnown RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 NMES1Q9C002 83 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 OR10A2Q9H208 303 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 CHMP1AQ9HD42 196 aaPredicted RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 A0A0U1RQV5 110 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 C5orf51A6NDU8 294 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 OTX1P32242 354 aaPredicted RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 CSNK1A1P48729 337 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 SUPT4H1P63272 117 aaKnown RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 HIST1H3AP68431 136 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 SNTB1Q13884 538 aaKnown RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 FAM189A2Q15884 450 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 HIST2H3PS2Q5TEC6 136 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 AADACL3Q5VUY0 350 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 Q6ZSR3 168 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 HIST2H3AQ71DI3 136 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 INO80EQ8NBZ0 244 aaPredicted RBP13.95□□□□□ -0.18
HOXD3-202ENST00000410016 GJC3Q8NFK1 279 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 OR5AP2Q8NGF4 316 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 OR5D18Q8NGL1 313 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 PGAM5Q96HS1 289 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 FAM117AQ9C073 453 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 ZNF160Q9HCG1 818 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 V9GYS6 101 aa13.95□□□□□ -0.18
HOXD3-202ENST00000410016 C13orf42A0A1B0GVH6 325 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 F5H5K5 113 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 TSPAN4O14817 238 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 GP1BAP07359 652 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 CCL3P10147 92 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 EIF3IQ13347 325 aaKnown RBP13.94□□□□□ -0.18
HOXD3-202ENST00000410016 CLEC18BQ6UXF7 455 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 TMEM123Q8N131 208 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 UCN2Q96RP3 112 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 GHRLQ9UBU3 117 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 ATPIF1Q9UII2 106 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 IGHV3-15A0A0B4J1V0 119 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 OR5H15A6NDH6 313 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 F5H0A9 414 aaPredicted RBP13.94□□□□□ -0.18
HOXD3-202ENST00000410016 H0YIZ8 118 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 KLF7O75840 302 aaPredicted RBP13.94□□□□□ -0.18
HOXD3-202ENST00000410016 NR2C1P13056 603 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 PGAM2P15259 253 aa13.94□□□□□ -0.18
HOXD3-202ENST00000410016 PPIAP62937 165 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms