RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GGNQ86UU5 652 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 NAXDQ8IW45 347 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM104Q8NE00 496 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 PSMF1Q92530 271 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 OR6C65A6NJZ3 312 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 SGCEO43556 437 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 RP2O75695 350 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 CSN2P05814 226 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 GLAP06280 429 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF20P17024 532 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 MECP2P51608 486 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 PRSS12P56730 875 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 RSPO1Q2MKA7 263 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 WIPI1Q5MNZ9 446 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 GVQW1Q8N7I0 195 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 ELMOD3Q96FG2 381 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 PDCD10Q9BUL8 212 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 FOXD3Q9UJU5 478 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 KNTC1P50748 2209 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 FRYQ5TBA9 3013 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 CFAP47Q6ZTR5 3102 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 IGKV1-9A0A0C4DH69 117 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 F5H5K5 113 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 RGS11O94810 467 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 S100A9P06702 114 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 MSR1P21757 451 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 CLDN15P56746 228 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 RAC1P63000 192 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 AWAT2Q6E213 333 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 NPRL2Q8WTW4 380 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 ROBO4Q8WZ75 1007 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 R4GN57 208 aa13.35□□□□□ -0.27
SCAMP4-202ENST00000409472 SPENQ96T58 3664 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 CREBL2O60519 120 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 P04436 131 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 JMJD7P0C870 316 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 GNB3P16520 340 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF93P35789 620 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 HFEQ30201 348 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 Q3ZCU0 254 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 OR52W1Q6IF63 320 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 MOB1AQ9H8S9 216 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 FARSAQ9Y285 508 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 PRRC2CQ9Y520 2896 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 MED13Q9UHV7 2174 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 CD59P13987 128 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 FKBP2P26885 142 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 SLC6A9P48067 706 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 NKPD1Q17RQ9 610 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF260Q3ZCT1 412 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 SPINK14Q6IE38 97 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 CRIP3Q6Q6R5 217 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 FJX1Q86VR8 437 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 ANGPTL5Q86XS5 388 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 MUC20Q8N307 709 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 MEIOBQ8N635 442 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 OR5D18Q8NGL1 313 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 OR5D14Q8NGL3 314 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 AQP3Q92482 292 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 FBXO17Q96EF6 278 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 ALKBH3Q96Q83 286 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 SPRY4Q9C004 299 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 GPR160Q9UJ42 338 aa13.34□□□□□ -0.27
SCAMP4-202ENST00000409472 DMXL1Q9Y485 3027 aa13.33□□□□□ -0.27
SCAMP4-202ENST00000409472 POM121CA8CG34 1229 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 DHHO43323 396 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 TLX3O43711 291 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 CXCL13O43927 109 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 RAB3DO95716 219 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 HPP00738 406 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 ZNF735P0CB33 412 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 H2BFSP57053 126 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 ACTBP60709 375 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 ACTG1P63261 375 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 CSNK2A1P68400 391 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 CHST4Q8NCG5 386 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 SGCZQ96LD1 299 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 ULBP2Q9BZM5 246 aa13.33□□□□□ -0.28
SCAMP4-202ENST00000409472 TRAPPC6AO75865 159 aa13.32□□□□□ -0.28
SCAMP4-202ENST00000409472 AMY2AP04746 511 aa13.32□□□□□ -0.28
SCAMP4-202ENST00000409472 S100A8P05109 93 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms