RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ZNF141Q15928 474 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 PABPC1L2AQ5JQF8 200 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 LFNGQ8NES3 379 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 SLC35B4Q969S0 331 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 C12orf10Q9HB07 376 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 ADIRFQ15847 76 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 VMA21Q3ZAQ7 101 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 OIT3Q8WWZ8 545 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 EXTL1Q92935 676 aa22.44■■□□□ 1.18
SPIRE1-202ENST00000409402 FUT3P21217 361 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 TMUB2Q71RG4 321 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 NUFIP2Q7Z417 695 aaKnown RBP22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 B3GNTL1Q67FW5 361 aaPredicted RBP22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF425Q6IV72 752 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 UCK1Q9HA47 277 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 TTC3P53804 2025 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 IGHV5-10-1A0A0J9YXX1 117 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 PATE3B3GLJ2 98 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 WNT3P56703 355 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 LINC00299Q6ZSB3 139 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 TRAV1-2A0A0B4J238 106 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 ANGPTL7O43827 346 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 CD3EP07766 207 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF32P17041 273 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 SRP14P37108 136 aaKnown RBP22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 RPL35P42766 123 aaKnown RBP22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 NPEPL1Q8NDH3 523 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 TMEM104Q8NE00 496 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 GNPNAT1Q96EK6 184 aaPredicted RBP22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF225Q9UK10 706 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 LAMB2P55268 1798 aa22.43■■□□□ 1.18
SPIRE1-202ENST00000409402 A0A0B4J203 849 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 GIPP09681 153 aaPredicted RBP22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 TNFAIP6P98066 277 aaPredicted RBP22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF774Q6NX45 483 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 TMEM182Q6ZP80 229 aaPredicted RBP22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 RND1Q92730 232 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 NDFIP1Q9BT67 221 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 SIPA1L3O60292 1781 aaPredicted RBP22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 CA6P23280 308 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 KIAA0040Q15053 153 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 MPPED2Q15777 294 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 DDOQ99489 341 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 SLC6A13Q9NSD5 602 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 GALNSP34059 522 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 PIGPP57054 158 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 ASAH1Q13510 395 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 DMRTC1Q5HYR2 192 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 OR4Q3Q8NH05 313 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 PTDSS2Q9BVG9 487 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 AMDHD2Q9Y303 409 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 CDC14BO60729 498 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 CD160O95971 181 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 C17orf107Q6ZR85 190 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 FAM58AQ8N1B3 248 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 MFSD4AQ8N468 514 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 H2AFB1P0C5Y9 115 aa22.42■■□□□ 1.18
SPIRE1-202ENST00000409402 LRP3O75074 770 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 IAPPP10997 89 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 C12orf73Q69YU5 71 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 SLC38A6Q8IZM9 456 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 CCL17Q92583 94 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 TM4SF19Q96DZ7 209 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 SFTPCP11686 197 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 OR10AD1Q8NGE0 317 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 PRR7Q8TB68 274 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 SOX7Q9BT81 388 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 SMLR1H3BR10 107 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 RER1O15258 196 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 EPPINO95925 133 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 CD3DP04234 171 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 DBX2Q6ZNG2 339 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 RASL10BQ96S79 203 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 SH2D7A6NKC9 451 aaPredicted RBP22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 NUPL2O15504 423 aaKnown RBP22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 CT62P0C5K7 136 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 MED9Q9NWA0 146 aa22.41■■□□□ 1.18
SPIRE1-202ENST00000409402 UCNP55089 124 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 OSGIN2Q9Y236 505 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 SSBP1Q04837 148 aaKnown RBP22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 ACOT6Q3I5F7 207 aaPredicted RBP22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 TSPAN32Q96QS1 320 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 TUBG2Q9NRH3 451 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 PSENENQ9NZ42 101 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 C20orf202A1L168 122 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 ACTL6AO96019 429 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 M6PRP20645 277 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 BHLHA15Q7RTS1 189 aaPredicted RBP22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF705GA8MUZ8 300 aaPredicted RBP22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 SLC17A2O00624 439 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 PI3P19957 117 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 PPP1CBP62140 327 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 MARCH1Q8TCQ1 289 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 DHRS3O75911 302 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 JTBO76095 146 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 ZNF816Q0VGE8 651 aaPredicted RBP22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 ORAI1Q96D31 301 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 C20orf141Q9NUB4 165 aa22.4■■□□□ 1.18
SPIRE1-202ENST00000409402 SMIM18P0DKX4 95 aa22.39■■□□□ 1.18
SPIRE1-202ENST00000409402 RTN4IP1Q8WWV3 396 aaPredicted RBP22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms