RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ZMAT1Q5H9K5 638 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TMEM91Q6ZNR0 172 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 DTX2Q86UW9 622 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 FBXL14Q8N1E6 418 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 PIGTQ969N2 578 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TMEM203Q969S6 136 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 DERL3Q96Q80 235 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 OR14A2Q96R54 314 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 SYT3Q9BQG1 590 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 SLC30A2Q9BRI3 323 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CHST5Q9GZS9 411 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 PLEKHF2Q9H8W4 249 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CYSLTR2Q9NS75 346 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 MYEF2Q9P2K5 600 aaKnown RBP17.5■□□□□ 0.39
VSX1-203ENST00000409285 GPR160Q9UJ42 338 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 ENPP5Q9UJA9 477 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TIMM8AO60220 97 aaPredicted RBP17.49■□□□□ 0.39
VSX1-203ENST00000409285 FAHP16930 419 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 FGF9P31371 208 aaPredicted RBP17.49■□□□□ 0.39
VSX1-203ENST00000409285 SWI5Q1ZZU3 235 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 MST1LQ2TV78 715 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 ALKBH6Q3KRA9 238 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 TIMM50Q3ZCQ8 353 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 ACSM3Q53FZ2 586 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 PAMR1Q6UXH9 720 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 UTS2BQ765I0 119 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 GPR141Q7Z602 305 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 UBASH3BQ8TF42 649 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 MARVELD3Q96A59 401 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 TMIGD2Q96BF3 282 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 ADAT3Q96EY9 351 aaPredicted RBP17.49■□□□□ 0.39
VSX1-203ENST00000409285 SLC22A4Q9H015 551 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 ABCB9Q9NP78 766 aa17.49■□□□□ 0.39
VSX1-203ENST00000409285 ABCA12Q86UK0 2595 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 AKAP6Q13023 2319 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 GABRPO00591 440 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 LMX1BO60663 402 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 FSTP19883 344 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 AGAP6Q5VW22 663 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 ZNF529Q6P280 563 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 C20orf204Q6ZNR8 217 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 GDPGP1Q6ZNW5 385 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 SERPINA12Q8IW75 414 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 BHLHE23Q8NDY6 225 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 TECTBQ96PL2 329 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 NOP16Q9Y3C1 178 aaKnown RBP17.48■□□□□ 0.39
VSX1-203ENST00000409285 MPC1Q9Y5U8 109 aa17.48■□□□□ 0.39
VSX1-203ENST00000409285 A0A1W2PPW3 197 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 PLSCR5A0PG75 271 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 ANKRD30BLA7E2S9 258 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 H3BSH0 61 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 LILRA1O75019 489 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 GPX5O75715 221 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 ALX3O95076 343 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 UCHL1P09936 223 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 ZNF20P17024 532 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 CLVS2Q5SYC1 327 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 C11orf71Q6IPW1 123 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 SATL1Q86VE3 508 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 FGGYQ96C11 551 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 FUNDC2Q9BWH2 189 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 CBLN4Q9NTU7 201 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 TAAR3PQ9P1P4 343 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 RHBDD3Q9Y3P4 386 aa17.47■□□□□ 0.39
VSX1-203ENST00000409285 ANKRD17O75179 2603 aaKnown RBP17.46■□□□□ 0.39
VSX1-203ENST00000409285 ANKRD61A6NGH8 418 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 M0R233 179 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 ADH4P08319 380 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 GADD45AP24522 165 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 MAGEB1P43366 347 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 SOX2P48431 317 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 SNRPD2P62316 118 aaKnown RBP17.46■□□□□ 0.39
VSX1-203ENST00000409285 INSL4Q14641 139 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 NKPD1Q17RQ9 610 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 ASPHD2Q6ICH7 369 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 CEACAM19Q7Z692 300 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 TMEM200AQ86VY9 491 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 OR5AS1Q8N127 324 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 OR5D14Q8NGL3 314 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 OR13G1Q8NGZ3 307 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 PAPOLGQ9BWT3 736 aaKnown RBP17.46■□□□□ 0.39
VSX1-203ENST00000409285 UBTD1Q9HAC8 227 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 BATF3Q9NR55 127 aa17.46■□□□□ 0.39
VSX1-203ENST00000409285 GMDSO60547 372 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 ARL6IP5O75915 188 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 Q6ZR03 302 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 ANKRD13BQ86YJ7 626 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 TRMT61AQ96FX7 289 aaKnown RBP17.45■□□□□ 0.38
VSX1-203ENST00000409285 TRAF4Q9BUZ4 470 aaPredicted RBP17.45■□□□□ 0.38
VSX1-203ENST00000409285 OR51E2Q9H255 320 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 TMEM100Q9NV29 134 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 ZDHHC8Q9ULC8 765 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 SSR3Q9UNL2 185 aa17.45■□□□□ 0.38
VSX1-203ENST00000409285 DPPA5A6NC42 116 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 ZSCAN5BA6NJL1 495 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 PIN1P1O15428 100 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 GABARAPO95166 117 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 NRASP01111 189 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 CD8AP01732 235 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 SOD3P08294 240 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms